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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 82.5
Min pTPM: 7.0
Std pTPM: 16.0
Median pTPM: 39.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
82.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
81.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
80.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
75.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
73.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
73.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
71.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
70.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
68.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
67.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
63.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
62.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
61.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
59.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
58.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
58.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
58.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
56.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
56.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
56.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
56.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
55.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
54.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
54.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
53.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
51.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
51.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
49.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
49.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
48.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
48.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
48.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
48.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
48.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
47.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
47.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
45.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
45.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
44.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
43.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
42.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
42.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
42.4
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
42.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
42.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
41.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
40.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
40.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
40.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
39.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
38.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
38.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
38.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
37.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
37.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
36.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
36.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
36.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
34.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
33.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
33.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
33.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
32.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
32.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
32.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
32.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
32.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
31.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
31.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
30.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
30.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
30.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
29.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
29.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
29.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
29.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
29.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
29.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
28.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
28.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
28.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
27.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
26.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
26.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
26.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
25.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
25.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
23.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
22.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
22.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
22.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
21.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
21.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
19.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
19.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
18.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
17.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
7.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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