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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 56897.1
Min pTPM: 2435.5
Std pTPM: 8138.2
Median pTPM: 7189.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
56897.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
33945.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
32797.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
32322.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
30217.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
23345.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
21936.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
21375.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
19986.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
19215.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
18870.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
18841.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
16197.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
15813.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
15743.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
15572.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15299.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
15245.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
15179.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
15150.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
15134.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
14261.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
13712.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
13310.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
13249.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
12892.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
12881.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
11371.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
11213.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
10538.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
10444.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
9973.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
9672.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
9416.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
9366.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
9297.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
9151.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
9100.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
8788.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
8671.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
8394.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
8202.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
8133.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
7918.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
7891.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
7749.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
7733.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
7695.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
7615.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
7206.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
7172.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
7102.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
7086.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
7077.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6915.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
6893.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
6794.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
6776.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
6728.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
6430.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
6284.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
6281.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
6246.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
6123.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
6064.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
6012.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
5971.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
5924.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
5909.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
5729.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
5643.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
5577.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
5433.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
5299.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
5284.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
5229.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
5218.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
5208.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
5171.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
5135.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
4911.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
4805.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
4613.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
4527.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
4510.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
4437.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
4352.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
4268.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
4130.9
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
4004.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
3731.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
3694.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
3501.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
3431.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
3320.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
3281.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
3172.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
3067.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
2959.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
2435.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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