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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 87.6
Min pTPM: 7.1
Std pTPM: 18.9
Median pTPM: 35.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
87.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
81.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
80.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
76.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
72.5
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
72.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
71.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
69.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
69.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
67.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
67.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
66.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
66.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
65.3
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
63.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
63.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
62.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
62.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
60.4
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
60.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
59.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
59.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
59.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
55.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
54.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
53.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
51.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
51.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
50.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
50.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
50.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
49.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
49.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
49.6
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
47.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
46.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
46.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
46.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
44.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
43.2
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
43.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
42.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
42.4
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
42.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
41.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
39.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
39.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
39.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
38.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
38.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
38.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
38.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
38.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
37.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
37.7
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
37.2
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
37.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
37.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
36.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
36.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
35.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
35.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
34.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
34.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
33.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
33.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
33.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
33.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
32.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
32.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
32.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
31.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
31.6
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
31.1
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
30.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
30.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
29.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
29.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
27.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
26.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
26.8
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
26.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
26.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
26.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
25.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
25.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
25.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
25.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
23.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
23.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
22.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
22.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
21.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
20.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
20.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
20.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
19.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
19.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
18.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
18.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
18.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
18.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
17.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
17.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
17.3
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
16.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
15.5
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
14.8
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
14.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
13.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
13.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
13.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
13.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
13.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
12.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
11.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
11.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
10.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
10.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
9.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
9.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
7.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
7.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.