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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA077238
Glial cells
Not detected
Neuronal cells
Not detected
Neuronal projections
Not detected
Synapses
High
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 20.8
Samples: 160
Max pTPM: 60.4
Min pTPM: 0.3
Std pTPM: 14.0
Median pTPM: 20.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
60.4
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
59.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
49.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
49.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
47.9
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
47.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
46.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
43.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
43.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
43.4
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
42.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
42.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
42.1
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
42.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
41.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
41.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
39.6
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
39.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
38.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
37.4
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
37.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
36.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
36.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
36.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
36.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
35.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
35.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
35.5
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
35.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
34.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
33.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
33.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
33.5
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
33.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
32.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
32.0
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
32.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
31.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
30.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
30.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
30.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
30.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
30.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
30.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
29.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
29.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
29.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
28.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
28.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
28.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
28.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
28.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
26.7
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
26.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
26.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
26.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
26.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
26.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
26.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
25.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
25.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
25.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
25.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
25.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
25.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
25.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
24.8
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
24.8
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
24.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
23.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
22.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
22.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
22.4
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
22.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
21.9
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
21.9
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
21.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
21.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
21.0
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
20.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
20.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
20.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
19.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
19.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
19.6
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
19.5
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
19.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
19.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
19.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
19.0
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
18.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
17.5
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
17.3
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
17.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
17.0
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
16.6
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
16.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
16.4
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
16.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
15.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
14.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
13.6
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
13.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
12.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
12.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
11.8
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
11.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
11.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
11.2
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
10.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
10.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
9.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
9.6
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
9.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
9.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
9.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
8.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
7.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
7.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
6.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
6.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
6.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
6.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
6.4
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
6.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
5.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
5.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
5.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
5.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
5.3
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
5.1
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
5.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
4.9
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
4.6
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
4.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
4.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
4.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
4.0
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
3.7
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
3.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
3.5
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
3.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
3.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
2.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
2.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
2.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
2.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
2.4
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
2.4
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
2.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
1.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
1.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
1.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
1.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
1.3
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
1.1
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
0.5
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
0.4
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
0.3
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
0.3
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.