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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 39.5
Min pTPM: 0.8
Std pTPM: 7.3
Median pTPM: 15.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
39.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
31.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
29.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
27.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
26.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
25.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
25.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
24.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
24.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
23.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
23.5
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
23.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
22.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
22.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
21.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
21.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
21.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
20.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
20.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
20.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
20.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
20.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
19.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
19.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
19.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
19.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
19.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
18.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
18.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
18.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
18.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
17.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
17.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
17.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
17.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
17.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
17.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
16.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
16.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
16.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
16.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
16.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
16.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
16.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
16.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
16.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
15.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
15.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
15.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
15.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
15.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
15.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
15.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
15.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
15.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
14.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
14.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
14.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
14.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
13.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
13.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
12.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
12.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
12.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
11.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
11.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
11.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
10.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
9.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
9.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
9.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
9.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
8.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
8.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
8.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
7.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
7.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
7.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
7.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
7.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
6.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
6.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
6.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
6.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
6.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
5.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
5.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
5.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
4.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
4.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
4.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
3.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
3.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
2.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
2.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
1.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
0.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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