We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 19.4
Samples: 160
Max pTPM: 63.3
Min pTPM: 2.2
Std pTPM: 10.3
Median pTPM: 18.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
63.3
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
51.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
50.7
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
48.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
45.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
43.1
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
39.4
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
38.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
38.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
37.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
35.0
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
35.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
32.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
32.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
31.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
31.8
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
30.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
30.5
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
30.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
30.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
29.7
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
28.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
28.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
28.2
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
28.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
28.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
27.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
27.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
26.8
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
26.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
26.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
26.5
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
26.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
26.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
26.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
26.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
25.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
25.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
25.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
25.5
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
25.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
25.0
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
24.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
24.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
24.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
24.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
24.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
23.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
23.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
22.9
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
22.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
22.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
22.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
21.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
21.7
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
21.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
21.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
21.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
21.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
21.4
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
21.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
21.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
21.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
20.9
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
20.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
20.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
20.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
20.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
20.5
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
20.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
20.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
20.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
20.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
19.9
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
19.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
19.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
19.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
19.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
18.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
18.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
18.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
18.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
18.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
18.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
17.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
17.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
17.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
17.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
17.1
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
16.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
16.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
16.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
16.2
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
16.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
16.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
15.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
15.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
15.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
15.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
15.5
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
15.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
15.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
15.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
15.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
14.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
14.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
14.6
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
14.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
14.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
14.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
14.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
14.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
13.8
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
13.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
13.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
13.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
13.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
13.2
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
12.9
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
12.5
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
12.2
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
12.2
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
12.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
12.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
12.0
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
12.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
11.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
11.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
11.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
10.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
10.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
9.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
8.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
8.7
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
8.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
8.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
8.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
7.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
7.5
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
7.4
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
7.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
7.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
6.5
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
6.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
6.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
6.3
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
6.3
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
6.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
6.1
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
5.9
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
5.6
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
5.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
5.2
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
4.5
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
4.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
4.3
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
3.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
3.0
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
2.5
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
2.2
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.