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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 2416.3
Min pTPM: 106.9
Std pTPM: 357.2
Median pTPM: 621.1
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
2416.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1930.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
1799.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
1530.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
1412.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
1349.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1286.0
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
1275.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1270.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
1248.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
1220.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
1210.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1199.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
1170.1
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1165.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1112.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1098.3
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
1092.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
1065.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
1038.2
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
971.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
965.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
955.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
944.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
936.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
930.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
902.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
877.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
873.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
856.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
855.7
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
853.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
853.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
850.0
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
842.7
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
836.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
831.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
829.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
829.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
820.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
801.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
792.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
792.1
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
788.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
786.5
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
785.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
770.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
768.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
765.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
695.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
695.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
693.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
691.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
689.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
685.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
679.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
642.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
633.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
630.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
623.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
622.9
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
621.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
620.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
611.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
601.2
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
597.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
590.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
584.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
575.5
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
574.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
574.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
572.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
572.1
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
565.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
561.3
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
558.3
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
553.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
541.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
537.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
534.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
531.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
530.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
519.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
510.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
509.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
504.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
502.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
486.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
486.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
486.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
476.5
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
469.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
467.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
459.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
457.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
456.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
452.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
450.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
447.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
445.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
443.2
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
440.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
438.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
423.4
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
423.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
410.5
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
403.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
385.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
374.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
359.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
356.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
353.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
338.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
338.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
336.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
320.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
295.9
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
289.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
272.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
271.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
240.4
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
204.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
106.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.