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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 5083.4
Min pTPM: 276.0
Std pTPM: 715.7
Median pTPM: 1054.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
5083.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2671.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
2568.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
2551.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
2446.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
2425.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
2402.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
2376.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
2332.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
2258.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
2250.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
2195.6
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
2176.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
2061.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
2043.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
2030.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
2022.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
2015.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
2014.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
1950.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
1938.1
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
1937.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
1909.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
1900.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
1885.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
1851.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
1798.9
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
1779.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1697.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1663.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1615.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1590.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1580.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
1579.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1577.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
1569.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
1560.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
1560.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1544.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1542.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
1537.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1534.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
1511.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
1466.4
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
1401.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1395.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1362.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
1346.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
1308.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
1291.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
1264.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
1259.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
1252.7
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
1237.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
1225.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1139.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
1095.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
1095.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
1092.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1088.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
1066.1
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
1054.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1038.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
1037.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1036.2
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
1035.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
990.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
987.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
979.5
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
961.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
946.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
906.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
902.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
901.5
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
897.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
890.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
888.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
875.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
849.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
839.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
837.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
819.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
810.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
761.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
753.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
692.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
692.7
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
686.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
684.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
679.1
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
671.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
658.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
648.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
633.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
631.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
622.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
621.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
598.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
592.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
588.4
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
586.2
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
585.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
559.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
555.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
552.5
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
514.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
507.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
499.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
495.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
484.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
463.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
462.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
423.6
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
421.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
408.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
396.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
389.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
382.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
371.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
328.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
317.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
289.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
276.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.