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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 172.3
Min pTPM: 4.3
Std pTPM: 34.9
Median pTPM: 36.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
172.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
170.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
162.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
134.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
129.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
129.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
111.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
103.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
101.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
100.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
97.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
92.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
88.1
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
83.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
82.7
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
81.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
81.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
81.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
77.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
77.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
77.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
77.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
76.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
74.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
74.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
74.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
72.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
72.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
69.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
66.8
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
66.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
64.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
60.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
60.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
57.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
57.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
56.0
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
55.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
54.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
54.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
53.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
53.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
52.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
52.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
51.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
49.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
48.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
48.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
47.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
47.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
47.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
47.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
44.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
44.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
42.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
41.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
41.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
40.4
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
40.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
40.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
37.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
36.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
35.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
35.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
35.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
35.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
33.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
33.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
33.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
33.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
32.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
32.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
29.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
28.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
28.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
27.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
27.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
26.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
26.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
23.7
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
23.6
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
23.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
23.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
22.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
22.0
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
21.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
21.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
21.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
21.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
21.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
21.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
20.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
19.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
18.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
18.5
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
18.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
18.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
18.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
17.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
15.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
15.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
15.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
15.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
15.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
15.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
14.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
14.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
13.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
12.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
12.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
12.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
11.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
11.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
10.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
10.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
10.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
9.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
9.2
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
8.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
7.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
6.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
6.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
4.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.