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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 132.6
Min pTPM: 11.3
Std pTPM: 18.1
Median pTPM: 41.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
132.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
85.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
78.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
75.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
72.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
70.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
69.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
66.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
66.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
65.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
64.0
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
61.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
60.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
59.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
56.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
56.6
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
54.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
53.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
52.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
51.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
50.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
50.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
50.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
50.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
50.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
49.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
49.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
48.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
48.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
47.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
47.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
47.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
47.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
46.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
45.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
45.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
45.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
44.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
43.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
43.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
42.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
42.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
42.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
41.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
41.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
40.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
39.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
39.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
39.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
39.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
38.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
38.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
37.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
37.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
37.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
36.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
36.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
35.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
35.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
34.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
34.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
34.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
34.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
34.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
33.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
33.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
32.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
31.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
30.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
30.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
30.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
30.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
29.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
28.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
24.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
24.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
23.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
23.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
23.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
20.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
19.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
19.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
19.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
18.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
17.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
15.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
12.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
11.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.