We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 64.4
Samples: 160
Max pTPM: 170.1
Min pTPM: 4.0
Std pTPM: 39.8
Median pTPM: 64.1
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
170.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
155.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
155.7
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
153.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
150.0
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
139.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
130.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
128.7
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
128.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
128.4
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
125.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
123.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
123.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
122.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
120.1
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
119.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
118.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
117.7
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
116.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
114.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
113.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
109.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
108.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
107.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
106.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
106.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
104.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
104.1
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
102.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
101.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
101.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
101.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
99.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
99.7
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
99.3
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
98.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
98.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
98.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
97.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
94.6
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
94.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
94.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
93.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
91.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
90.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
90.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
90.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
89.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
87.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
86.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
86.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
85.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
85.9
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
85.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
84.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
83.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
83.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
83.4
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
83.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
81.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
80.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
79.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
78.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
74.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
73.8
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
72.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
69.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
69.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
68.5
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
68.0
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
67.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
67.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
67.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
66.6
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
66.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
65.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
65.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
64.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
64.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
64.2
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
63.9
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
63.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
62.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
61.6
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
61.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
60.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
60.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
60.3
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
59.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
58.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
58.5
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
58.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
57.2
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
53.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
52.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
47.6
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
47.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
46.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
45.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
45.3
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
44.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
44.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
42.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
41.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
40.9
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
40.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
39.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
38.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
37.4
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
37.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
36.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
35.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
34.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
34.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
34.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
32.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
30.4
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
29.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
29.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
26.8
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
26.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
25.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
25.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
24.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
24.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
22.2
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
22.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
21.3
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
20.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
19.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
19.5
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
19.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
18.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
18.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
18.3
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
17.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
17.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
16.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
16.2
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
16.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
15.8
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
15.8
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
14.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
14.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
12.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
12.4
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
12.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
12.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
11.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
11.1
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
10.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
10.3
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
7.9
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
7.7
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
7.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
7.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
5.6
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
5.0
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
4.4
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
4.0
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.