We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 55.5
Samples: 160
Max pTPM: 108.5
Min pTPM: 14.5
Std pTPM: 17.4
Median pTPM: 55.1
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
108.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
101.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
98.2
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
96.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
94.1
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
87.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
86.3
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
86.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
85.9
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
85.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
84.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
83.5
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
81.2
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
81.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
80.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
79.9
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
79.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
76.9
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
75.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
75.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
74.6
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
74.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
74.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
73.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
73.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
73.4
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
72.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
71.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
71.2
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
69.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
69.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
69.5
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
68.9
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
68.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
67.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
67.9
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
67.7
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
66.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
66.6
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
65.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
65.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
65.0
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
65.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
64.9
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
63.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
62.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
62.5
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
62.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
62.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
62.1
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
62.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
62.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
61.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
61.3
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
61.0
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
60.8
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
60.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
60.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
60.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
60.6
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
60.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
60.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
59.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
59.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
59.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
58.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
58.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
58.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
57.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
57.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
57.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
57.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
56.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
56.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
56.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
56.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
56.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
55.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
55.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
55.4
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
54.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
54.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
54.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
54.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
54.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
53.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
53.2
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
53.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
53.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
53.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
53.0
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
52.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
51.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
50.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
50.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
49.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
49.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
49.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
49.2
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
48.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
48.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
48.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
48.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
48.2
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
48.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
48.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
47.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
47.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
47.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
47.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
46.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
46.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
46.2
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
45.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
45.6
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
45.6
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
45.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
45.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
45.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
44.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
44.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
43.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
43.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
43.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
42.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
42.0
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
42.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
41.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
40.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
40.3
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
39.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
39.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
38.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
38.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
38.1
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
37.8
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
37.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
37.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
37.1
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
35.8
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
35.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
34.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
34.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
34.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
34.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
32.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
32.1
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
31.9
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
31.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
30.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
28.7
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
27.6
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
27.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
27.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
26.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
23.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
21.8
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
19.5
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
15.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
14.5
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.