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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 551.9
Min pTPM: 4.9
Std pTPM: 113.5
Median pTPM: 157.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
551.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
474.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
458.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
408.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
384.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
379.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
378.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
331.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
325.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
311.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
295.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
286.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
283.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
278.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
276.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
275.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
274.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
258.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
254.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
246.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
245.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
243.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
241.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
233.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
232.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
229.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
223.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
221.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
219.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
217.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
217.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
216.4
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
216.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
213.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
209.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
209.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
206.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
193.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
190.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
186.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
183.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
182.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
173.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
168.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
168.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
165.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
164.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
163.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
161.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
160.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
155.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
150.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
143.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
124.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
123.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
123.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
119.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
116.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
112.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
110.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
106.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
103.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
101.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
101.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
96.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
96.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
96.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
95.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
93.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
91.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
86.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
84.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
77.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
70.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
69.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
68.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
63.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
63.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
62.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
60.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
58.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
57.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
57.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
49.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
45.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
43.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
34.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
34.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
31.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
31.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
30.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
30.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
28.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
25.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
25.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
22.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
21.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
16.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
13.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
4.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.