We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 103.3
Samples: 160
Max pTPM: 397.5
Min pTPM: 4.5
Std pTPM: 75.3
Median pTPM: 88.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
397.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
285.1
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
283.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
276.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
275.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
270.3
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
262.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
259.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
258.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
257.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
245.5
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
232.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
231.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
219.6
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
219.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
216.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
212.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
208.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
202.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
201.9
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
199.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
197.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
195.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
182.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
177.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
175.5
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
175.0
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
173.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
171.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
170.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
167.1
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
160.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
160.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
160.4
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
157.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
155.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
154.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
152.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
152.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
150.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
148.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
145.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
140.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
139.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
137.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
136.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
132.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
131.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
130.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
129.7
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
128.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
127.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
127.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
123.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
123.3
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
119.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
118.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
118.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
116.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
116.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
114.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
109.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
106.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
105.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
103.5
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
102.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
101.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
101.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
100.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
100.4
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
100.0
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
97.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
97.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
95.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
94.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
94.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
93.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
90.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
89.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
88.9
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
88.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
87.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
87.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
87.3
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
85.1
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
84.7
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
81.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
79.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
78.4
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
78.3
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
75.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
75.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
73.6
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
70.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
68.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
67.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
66.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
65.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
64.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
64.3
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
64.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
60.9
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
60.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
60.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
60.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
60.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
59.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
59.2
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
57.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
55.6
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
53.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
51.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
51.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
51.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
49.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
47.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
47.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
47.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
47.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
42.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
41.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
41.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
40.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
39.5
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
38.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
36.8
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
36.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
35.6
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
32.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
31.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
28.0
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
27.6
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
26.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
26.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
24.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
24.4
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
23.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
23.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
22.1
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
21.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
20.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
20.2
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
19.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
19.5
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
19.1
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
18.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
18.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
17.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
17.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
15.8
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
15.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
13.9
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
13.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
12.9
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
11.1
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
10.0
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
9.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
9.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
9.4
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
4.5
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.