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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 629.5
Min pTPM: 13.2
Std pTPM: 91.8
Median pTPM: 109.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
629.5
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
352.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
351.3
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
335.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
321.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
319.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
239.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
236.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
231.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
221.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
209.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
207.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
207.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
203.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
193.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
191.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
190.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
186.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
184.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
170.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
166.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
165.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
151.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
151.5
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
151.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
150.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
147.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
140.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
135.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
134.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
133.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
130.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
130.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
124.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
124.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
124.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
122.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
120.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
119.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
118.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
114.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
114.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
112.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
111.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
107.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
106.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
101.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
100.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
100.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
99.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
98.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
97.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
96.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
94.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
92.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
90.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
88.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
88.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
85.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
85.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
84.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
84.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
84.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
82.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
81.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
76.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
75.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
71.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
69.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
69.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
68.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
68.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
66.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
58.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
51.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
50.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
45.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
43.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
38.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
37.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
37.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
35.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
32.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
31.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
30.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
29.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
29.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
13.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.