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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
409.5
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
1784.0
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
1689.0
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
1600.6
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
1540.5
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
1515.6
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
1489.9
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
1465.2
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
1340.8
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
1281.9
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
1273.7
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
1234.1
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
1231.7
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
1162.3
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
1144.9
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
1114.4
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
1069.4
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
1059.4
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
1027.6
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
994.3
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
942.7
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
921.5
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
920.0
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
915.9
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
889.1
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
881.8
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
872.8
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
867.7
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
863.9
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
854.9
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
851.8
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
851.2
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
842.1
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
831.5
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
741.9
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
741.3
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
716.8
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
710.3
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
709.9
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
706.8
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
704.7
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
703.5
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
696.3
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
694.8
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
692.7
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
690.1
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
689.8
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
687.4
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
686.6
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
683.8
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
680.1
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
676.8
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
676.3
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
673.2
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
670.7
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
662.7
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
662.6
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
661.6
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
656.0
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
655.1
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
652.6
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
644.5
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
637.8
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
633.1
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
632.1
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
623.8
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
620.3
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
618.9
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
614.5
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
613.7
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
612.9
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
611.2
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
608.6
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
604.4
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
604.0
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
603.5
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
598.4
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
595.1
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
587.6
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
586.9
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
585.1
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
581.6
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
578.7
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
573.8
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
573.7
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
568.1
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
567.5
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
563.7
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
561.1
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
559.2
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
552.2
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
551.4
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
547.7
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
539.4
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
538.1
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
526.1
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
522.9
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
519.4
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
518.7
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
508.0
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
507.5
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
507.3
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
505.7
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
503.5
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
500.8
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
497.1
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
493.9
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
493.2
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
490.4
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
490.4
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
489.5
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
489.0
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
487.6
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
483.3
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
483.3
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
478.9
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
478.5
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
476.6
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
475.6
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
472.0
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
470.5
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
469.3
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
469.1
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
467.4
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
464.1
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
462.7
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
462.1
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
461.7
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
460.9
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
460.1
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
456.2
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
454.8
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
452.6
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
451.3
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
450.9
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
449.0
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
448.8
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
446.6
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
446.4
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
445.4
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
444.7
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
437.9
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
437.4
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
434.0
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
432.6
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
431.6
TCGA-HQ-A2OE-01A
male, alive, 1174 days
430.3
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
428.4
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
427.1
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
426.7
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
426.5
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
425.7
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
417.8
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
414.3
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
409.3
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
404.9
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
404.7
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
404.1
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
403.6
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
401.5
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
400.8
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
400.0
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
396.4
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
395.8
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
392.8
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
389.5
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
388.5
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
387.2
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
383.1
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
381.3
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
380.8
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
380.2
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
376.6
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
373.8
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
373.6
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
372.7
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
372.1
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
371.1
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
369.6
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
368.0
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
367.8
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
367.2
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
367.2
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
366.0
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
364.5
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
361.5
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
361.5
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
358.3
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
358.0
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
357.8
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
357.6
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
356.1
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
355.4
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
354.4
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
351.8
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
349.8
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
347.6
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
345.7
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
344.9
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
344.1
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
343.3
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
342.8
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
342.7
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
341.2
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
340.7
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
339.7
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
339.4
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
337.5
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
335.1
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
333.8
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
332.7
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
332.2
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
331.4
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
330.7
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
330.7
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
327.3
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
326.4
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
323.3
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
322.4
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
319.6
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
319.0
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
317.9
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
317.5
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
317.3
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
317.2
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
316.2
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
310.6
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
308.7
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
307.0
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
306.9
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
306.8
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
306.7
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
304.4
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
304.3
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
304.1
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
299.4
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
298.8
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
298.3
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
297.9
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
296.5
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
296.1
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
295.9
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
295.8
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
295.2
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
294.6
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
293.7
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
293.4
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
290.1
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
288.9
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
287.2
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
287.1
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
287.1
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
285.4
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
285.3
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
284.8
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
284.2
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
283.4
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
283.1
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
280.8
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
279.6
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
277.9
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
276.9
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
276.7
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
275.4
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
273.4
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
272.8
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
271.3
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
268.6
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
267.9
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
267.1
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
267.1
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
266.5
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
263.7
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
262.4
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
261.7
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
261.4
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
261.4
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
260.7
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
260.4
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
259.4
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
258.8
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
258.2
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
257.5
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
256.7
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
256.3
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
255.0
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
254.2
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
253.9
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
252.6
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
252.5
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
252.0
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
248.6
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
244.2
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
244.2
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
242.2
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
241.0
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
240.9
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
239.8
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
239.6
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
237.0
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
235.8
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
235.6
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
227.9
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
226.4
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
226.1
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
225.9
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
225.5
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
225.1
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
221.9
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
221.5
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
221.0
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
216.9
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
214.0
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
210.0
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
206.1
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
206.1
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
204.1
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
202.6
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
201.7
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
201.3
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
199.6
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
198.1
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
197.4
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
197.4
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
194.0
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
193.7
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
192.5
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
190.1
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
190.0
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
189.8
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
189.4
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
189.4
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
189.1
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
188.0
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
187.1
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
187.0
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
186.8
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
186.7
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
185.2
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
184.9
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
183.5
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
183.2
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
181.5
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
181.4
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
179.5
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
173.2
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
173.1
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
171.6
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
171.3
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
169.7
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
167.6
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
167.1
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
166.5
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
164.7
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
164.6
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
163.0
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
162.9
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
162.1
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
162.1
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
159.4
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
158.8
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
156.8
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
154.1
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
153.6
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
153.5
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
151.1
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
150.5
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
146.0
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
145.9
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
145.8
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
144.4
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
141.5
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
141.3
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
140.8
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
136.1
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
132.9
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
130.4
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
128.3
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
125.9
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
123.2
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
122.5
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
121.5
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
114.7
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
111.8
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
111.4
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
110.4
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
105.9
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
103.3
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
101.8
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
101.8
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
91.4
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
90.2
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
78.2
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
74.7
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
72.1
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
71.8
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
69.6
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
69.0
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
60.0
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
55.5
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
51.1
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
50.2
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
49.0
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
45.1
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
33.6
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
33.4
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
15.6
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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