We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 68.9
Samples: 160
Max pTPM: 352.7
Min pTPM: 7.1
Std pTPM: 47.1
Median pTPM: 59.6
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
352.7
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
312.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
241.4
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
215.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
189.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
172.9
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
171.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
164.5
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
153.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
140.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
134.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
117.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
114.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
113.7
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
110.8
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
109.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
107.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
105.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
105.0
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
103.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
101.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
99.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
99.8
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
99.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
98.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
97.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
96.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
96.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
93.7
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
90.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
90.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
90.1
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
85.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
85.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
84.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
83.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
83.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
83.1
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
81.1
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
81.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
80.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
79.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
77.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
76.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
76.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
75.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
74.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
74.0
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
73.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
73.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
72.2
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
72.2
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
71.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
70.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
69.2
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
68.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
68.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
68.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
67.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
67.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
67.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
67.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
67.0
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
66.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
66.1
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
65.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
65.7
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
65.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
65.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
64.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
63.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
62.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
62.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
62.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
61.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
61.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
61.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
60.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
60.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
59.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
59.5
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
59.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
58.2
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
57.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
57.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
57.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
56.9
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
56.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
55.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
55.3
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
54.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
53.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
52.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
51.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
51.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
51.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
50.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
50.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
50.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
50.3
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
49.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
49.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
49.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
48.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
48.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
48.5
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
46.9
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
46.6
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
46.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
44.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
44.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
44.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
43.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
43.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
42.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
42.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
42.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
41.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
41.2
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
41.0
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
40.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
40.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
40.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
40.3
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
39.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
39.3
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
39.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
39.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
38.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
38.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
37.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
37.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
36.6
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
36.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
36.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
35.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
35.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
35.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
33.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
33.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
32.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
32.1
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
30.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
30.4
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
29.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
27.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
27.3
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
27.3
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
26.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
26.1
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
26.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
24.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
23.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
22.9
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
21.1
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
20.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
18.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
16.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
16.2
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
7.1
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.