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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 88.9
Min pTPM: 9.5
Std pTPM: 15.5
Median pTPM: 35.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
88.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
79.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
78.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
69.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
65.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
62.7
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
61.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
56.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
55.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
54.9
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
54.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
53.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
52.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
52.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
51.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
49.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
49.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
47.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
47.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
47.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
46.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
45.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
45.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
44.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
44.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
43.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
43.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
43.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
42.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
42.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
42.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
42.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
41.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
41.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
39.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
39.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
39.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
38.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
38.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
38.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
37.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
37.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
36.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
36.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
34.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
34.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
34.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
33.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
33.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
32.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
31.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
31.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
30.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
30.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
30.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
30.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
29.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
29.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
29.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
29.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
28.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
28.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
27.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
26.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
25.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
25.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
25.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
24.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
24.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
24.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
23.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
23.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
22.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
22.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
22.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
22.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
20.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
19.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
19.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
18.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
17.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
17.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
16.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
16.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
14.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
12.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
11.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
9.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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