We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 38.3
Samples: 160
Max pTPM: 119.4
Min pTPM: 4.7
Std pTPM: 18.8
Median pTPM: 38.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
119.4
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
93.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
87.0
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
83.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
78.2
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
71.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
71.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
69.7
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
68.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
68.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
68.2
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
67.3
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
66.7
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
66.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
62.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
62.2
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
61.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
61.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
60.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
58.6
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
58.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
57.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
56.2
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
55.7
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
55.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
55.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
54.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
53.9
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
53.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
53.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
53.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
51.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
51.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
51.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
51.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
51.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
50.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
50.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
49.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
49.2
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
49.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
49.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
48.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
48.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
48.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
47.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
47.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
47.0
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
46.7
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
46.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
46.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
45.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
44.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
44.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
44.7
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
44.6
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
44.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
44.0
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
43.9
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
43.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
43.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
43.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
43.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
42.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
40.9
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
40.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
40.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
40.7
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
40.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
40.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
40.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
40.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
40.2
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
39.6
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
39.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
39.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
39.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
39.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
39.1
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
38.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
38.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
37.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
37.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
36.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
36.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
36.3
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
36.0
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
35.8
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
35.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
34.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
34.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
34.7
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
34.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
34.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
33.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
33.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
32.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
31.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
31.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
31.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
30.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
30.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
29.7
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
29.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
29.7
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
29.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
29.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
29.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
28.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
28.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
28.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
27.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
27.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
27.3
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
25.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
25.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
24.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
24.7
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
24.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
24.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
23.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
23.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
22.4
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
22.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
21.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
21.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
21.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
21.2
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
20.4
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
20.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
20.1
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
20.0
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
19.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
18.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
18.2
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
17.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
17.0
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
16.7
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
16.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
16.3
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
16.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
15.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
15.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
15.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
14.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
14.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
12.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
12.3
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
12.3
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
12.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
12.0
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
11.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
10.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
10.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
10.5
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
10.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
8.6
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
7.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
7.1
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
4.7
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.