We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 79.5
Samples: 160
Max pTPM: 214.3
Min pTPM: 9.1
Std pTPM: 39.1
Median pTPM: 76.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
214.3
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
206.3
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
188.7
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
163.5
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
152.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
152.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
147.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
147.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
144.2
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
142.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
140.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
135.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
134.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
132.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
131.2
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
130.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
127.7
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
126.2
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
125.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
123.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
120.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
120.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
119.8
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
118.1
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
116.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
115.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
115.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
114.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
114.7
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
114.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
113.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
112.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
112.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
111.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
111.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
109.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
109.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
108.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
108.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
107.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
106.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
106.1
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
106.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
104.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
104.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
102.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
102.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
101.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
101.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
100.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
95.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
95.3
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
94.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
94.8
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
94.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
94.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
93.7
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
93.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
92.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
91.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
91.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
89.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
88.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
88.1
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
88.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
86.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
86.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
85.2
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
84.6
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
83.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
83.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
82.9
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
82.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
82.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
82.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
79.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
78.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
77.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
77.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
76.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
75.9
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
75.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
75.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
73.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
73.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
73.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
72.7
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
72.5
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
71.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
71.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
70.0
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
69.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
69.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
67.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
67.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
67.6
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
67.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
66.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
65.1
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
64.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
64.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
64.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
63.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
62.7
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
61.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
58.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
58.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
58.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
57.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
57.6
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
56.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
54.6
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
54.3
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
53.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
52.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
51.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
50.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
49.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
49.5
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
49.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
49.3
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
47.5
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
47.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
45.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
44.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
44.0
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
42.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
42.3
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
42.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
41.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
40.8
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
39.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
38.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
37.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
36.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
36.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
36.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
35.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
35.1
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
33.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
31.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
30.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
29.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
28.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
28.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
28.0
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
27.6
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
26.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
26.6
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
26.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
24.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
23.4
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
21.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
21.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
21.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
19.4
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
19.2
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
18.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
17.4
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
9.1
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.