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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 68.1
Min pTPM: 0.1
Std pTPM: 12.7
Median pTPM: 4.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
68.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
63.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
56.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
47.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
38.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
34.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
27.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
26.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
22.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
21.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
21.0
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
20.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
18.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
16.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
15.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
15.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
15.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
13.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
13.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
12.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
11.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
10.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
10.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
9.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
9.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
8.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
8.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
7.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
7.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
7.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
7.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
6.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
6.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
6.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
6.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
6.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
6.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
5.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
5.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
5.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
5.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
5.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
5.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
5.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
5.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
5.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
5.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
4.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
4.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
4.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
4.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
4.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
4.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
4.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
4.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
3.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
3.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
3.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
3.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
3.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
3.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
3.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
3.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
3.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
2.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
2.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
2.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
2.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
2.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
2.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
2.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
2.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
2.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
1.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
0.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
0.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
0.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
0.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
0.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
0.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
0.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
0.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
0.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
0.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
0.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
0.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
0.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
0.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
0.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
0.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
0.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
0.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.