We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 73.7
Samples: 160
Max pTPM: 229.2
Min pTPM: 5.0
Std pTPM: 40.0
Median pTPM: 72.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
229.2
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
186.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
179.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
168.3
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
167.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
157.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
155.0
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
154.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
148.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
142.4
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
140.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
139.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
134.9
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
131.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
129.8
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
127.6
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
123.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
122.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
119.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
118.9
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
117.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
117.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
116.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
116.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
115.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
114.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
109.8
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
105.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
103.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
103.5
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
103.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
100.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
99.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
98.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
97.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
97.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
97.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
96.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
96.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
95.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
95.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
93.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
93.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
92.4
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
91.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
90.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
90.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
90.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
90.4
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
88.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
87.3
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
87.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
86.8
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
86.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
85.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
84.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
84.6
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
84.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
84.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
84.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
83.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
83.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
81.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
80.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
80.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
79.7
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
79.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
79.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
77.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
77.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
77.6
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
76.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
75.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
75.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
74.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
74.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
74.2
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
72.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
72.1
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
72.1
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
72.0
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
71.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
71.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
70.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
70.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
70.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
69.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
68.9
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
67.1
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
66.6
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
66.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
65.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
62.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
59.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
58.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
57.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
57.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
57.7
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
57.1
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
56.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
56.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
56.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
55.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
55.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
54.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
53.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
53.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
53.5
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
52.8
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
51.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
50.4
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
49.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
49.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
48.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
48.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
44.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
43.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
42.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
42.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
41.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
41.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
39.8
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
39.7
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
38.3
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
38.0
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
37.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
37.9
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
37.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
37.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
36.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
35.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
34.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
33.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
32.4
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
31.9
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
31.2
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
30.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
30.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
29.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
29.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
28.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
27.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
27.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
26.3
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
25.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
23.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
22.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
21.9
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
21.6
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
20.8
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
20.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
19.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
19.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
18.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
17.8
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
13.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
12.9
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
10.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
8.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
5.0
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.