We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 37.3
Samples: 160
Max pTPM: 103.8
Min pTPM: 4.3
Std pTPM: 20.2
Median pTPM: 35.3
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
103.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
95.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
91.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
85.6
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
82.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
78.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
76.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
75.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
74.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
73.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
71.5
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
71.4
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
71.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
69.2
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
68.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
67.4
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
66.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
66.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
65.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
64.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
60.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
59.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
58.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
58.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
58.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
57.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
57.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
56.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
53.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
53.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
52.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
52.5
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
52.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
50.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
50.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
50.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
50.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
49.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
49.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
48.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
48.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
48.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
47.4
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
47.2
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
47.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
46.7
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
46.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
46.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
45.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
45.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
44.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
44.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
44.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
43.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
43.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
42.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
42.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
42.1
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
42.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
41.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
41.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
41.0
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
41.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
40.8
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
40.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
40.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
39.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
38.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
38.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
38.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
38.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
38.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
37.6
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
37.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
37.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
37.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
36.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
36.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
36.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
36.0
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
34.5
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
34.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
34.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
33.5
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
33.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
33.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
32.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
32.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
32.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
31.9
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
31.9
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
31.7
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
30.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
30.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
30.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
30.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
29.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
29.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
28.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
28.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
28.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
27.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
27.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
27.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
25.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
25.6
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
25.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
25.2
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
24.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
24.7
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
24.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
24.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
23.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
23.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
23.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
22.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
22.1
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
21.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
21.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
21.5
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
21.2
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
21.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
20.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
20.3
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
20.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
20.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
19.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
19.4
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
19.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
17.9
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
17.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
17.5
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
17.4
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
16.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
16.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
15.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
15.1
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
15.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
14.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
14.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
13.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
13.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
12.9
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
12.8
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
12.5
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
12.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
11.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
11.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
11.6
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
11.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
11.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
11.3
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
11.1
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
10.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
10.2
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
8.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
7.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
7.6
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
4.6
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
4.3
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.