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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA003925
Glial cells
Not detected
Neuronal cells
Not detected
Neuronal projections
High
Synapses
Medium
CAUDATE - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA064734
Glial cells
Not detected
Neuronal cells
Not detected
Neuronal projections
High
Synapses
Medium
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 393.8
Samples: 160
Max pTPM: 1454.4
Min pTPM: 53.9
Std pTPM: 217.9
Median pTPM: 372.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
1454.4
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
990.8
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
930.1
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
890.9
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
850.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
840.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
831.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
823.9
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
821.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
786.4
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
751.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
724.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
700.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
668.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
648.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
644.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
643.3
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
634.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
632.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
631.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
629.7
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
621.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
605.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
602.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
595.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
591.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
587.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
583.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
582.4
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
582.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
570.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
564.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
563.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
559.2
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
544.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
542.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
536.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
532.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
525.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
523.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
523.0
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
520.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
517.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
513.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
494.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
493.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
487.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
487.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
473.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
466.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
462.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
459.8
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
459.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
458.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
453.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
452.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
448.7
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
447.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
439.8
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
436.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
432.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
431.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
428.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
425.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
425.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
415.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
412.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
412.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
407.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
406.5
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
402.2
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
401.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
400.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
398.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
397.3
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
385.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
382.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
381.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
377.8
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
375.2
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
370.3
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
370.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
366.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
362.7
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
360.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
358.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
357.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
355.9
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
355.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
354.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
353.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
346.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
345.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
343.9
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
343.0
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
339.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
337.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
332.7
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
312.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
308.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
301.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
298.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
287.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
283.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
281.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
280.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
272.6
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
252.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
251.1
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
243.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
236.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
236.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
235.1
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
230.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
222.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
220.8
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
218.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
218.6
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
217.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
215.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
215.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
214.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
209.4
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
206.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
205.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
198.7
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
197.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
192.6
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
188.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
188.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
187.7
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
178.5
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
177.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
177.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
177.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
174.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
174.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
173.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
172.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
171.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
164.1
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
163.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
159.2
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
158.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
144.2
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
136.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
134.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
131.4
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
123.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
122.9
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
110.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
106.9
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
106.5
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
99.4
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
94.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
84.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
84.2
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
69.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
67.7
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
53.9
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.