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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1003.6
Min pTPM: 37.3
Std pTPM: 176.1
Median pTPM: 212.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
1003.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
815.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
641.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
605.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
581.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
529.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
522.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
515.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
491.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
488.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
487.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
448.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
440.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
438.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
434.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
411.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
406.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
405.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
389.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
382.8
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
362.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
347.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
345.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
345.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
311.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
310.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
305.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
299.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
298.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
298.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
297.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
295.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
286.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
279.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
268.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
263.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
262.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
258.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
251.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
244.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
238.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
235.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
235.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
215.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
209.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
208.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
199.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
190.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
189.9
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
175.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
172.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
172.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
169.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
164.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
163.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
157.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
157.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
152.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
150.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
145.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
140.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
137.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
136.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
136.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
134.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
133.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
131.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
127.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
121.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
118.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
117.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
117.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
115.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
112.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
110.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
103.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
101.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
89.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
86.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
78.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
75.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
74.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
65.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
61.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
61.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
56.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
53.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
37.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.