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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 242.5
Min pTPM: 12.5
Std pTPM: 57.0
Median pTPM: 95.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
242.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
241.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
236.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
230.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
225.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
222.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
205.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
194.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
194.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
185.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
180.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
170.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
168.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
165.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
165.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
163.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
157.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
157.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
156.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
155.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
155.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
154.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
152.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
149.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
144.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
143.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
143.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
140.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
139.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
138.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
137.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
130.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
126.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
126.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
124.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
124.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
122.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
121.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
120.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
119.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
117.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
114.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
112.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
112.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
110.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
104.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
101.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
96.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
95.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
95.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
94.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
93.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
89.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
89.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
88.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
87.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
86.6
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
86.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
86.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
80.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
79.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
72.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
70.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
69.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
68.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
66.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
64.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
63.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
62.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
61.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
61.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
59.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
57.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
57.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
56.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
56.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
53.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
52.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
50.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
50.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
50.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
49.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
48.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
43.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
40.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
39.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
38.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
36.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
35.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
35.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
35.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
33.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
32.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
30.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
28.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
26.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
24.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
12.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.