We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 204.8
Min pTPM: 11.0
Std pTPM: 33.2
Median pTPM: 78.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
204.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
141.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
140.1
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
126.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
125.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
124.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
123.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
121.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
121.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
120.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
120.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
117.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
117.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
115.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
114.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
111.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
111.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
110.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
106.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
106.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
105.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
104.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
104.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
101.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
100.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
100.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
100.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
99.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
97.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
97.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
97.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
95.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
93.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
92.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
91.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
91.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
90.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
90.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
89.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
87.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
87.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
86.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
84.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
84.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
82.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
80.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
80.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
79.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
79.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
78.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
77.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
77.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
77.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
75.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
74.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
72.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
69.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
68.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
68.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
68.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
68.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
67.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
66.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
65.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
65.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
62.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
60.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
59.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
58.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
58.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
56.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
56.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
56.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
51.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
50.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
50.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
50.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
49.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
48.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
48.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
48.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
45.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
45.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
40.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
40.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
39.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
38.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
38.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
37.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
37.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
35.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
28.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
27.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
27.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
22.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
19.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
18.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
11.0
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.