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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 807.5
Min pTPM: 8.3
Std pTPM: 172.8
Median pTPM: 186.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
807.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
683.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
652.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
559.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
558.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
536.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
491.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
488.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
484.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
481.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
456.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
449.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
443.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
418.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
416.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
415.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
412.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
403.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
392.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
391.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
375.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
371.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
370.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
360.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
345.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
343.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
331.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
325.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
325.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
320.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
317.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
310.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
290.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
283.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
283.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
282.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
269.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
259.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
258.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
253.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
242.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
239.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
225.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
224.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
216.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
212.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
208.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
196.3
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
189.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
188.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
184.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
172.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
160.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
159.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
153.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
147.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
146.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
145.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
145.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
143.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
139.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
127.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
127.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
125.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
120.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
113.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
112.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
109.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
109.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
105.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
105.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
88.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
87.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
85.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
81.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
79.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
77.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
72.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
69.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
67.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
66.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
60.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
59.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
57.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
50.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
49.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
47.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
46.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
45.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
43.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
42.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
26.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
26.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
24.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
23.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
20.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
13.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
11.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
10.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
8.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.