We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 18.9
Samples: 160
Max pTPM: 42.2
Min pTPM: 3.0
Std pTPM: 8.6
Median pTPM: 19.3
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
42.2
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
39.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
39.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
37.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
37.1
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
35.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
34.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
32.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
32.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
31.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
31.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
30.9
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
30.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
30.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
30.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
29.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
29.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
29.2
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
29.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
29.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
28.9
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
28.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
28.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
28.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
28.0
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
27.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
27.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
26.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
26.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
26.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
26.5
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
26.3
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
26.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
26.1
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
25.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
25.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
25.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
25.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
25.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
25.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
25.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
25.1
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
24.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
24.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
24.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
24.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
24.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
24.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
24.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
24.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
24.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
23.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
23.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
23.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
23.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
23.0
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
22.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
22.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
22.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
22.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
22.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
22.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
22.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
21.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
21.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
20.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
20.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
20.5
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
20.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
20.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
20.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
20.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
19.9
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
19.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
19.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
19.5
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
19.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
19.4
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
19.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
19.3
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
19.3
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
19.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
18.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
18.9
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
18.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
18.7
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
18.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
18.3
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
18.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
17.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
17.4
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
17.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
17.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
16.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
16.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
16.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
16.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
16.3
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
16.2
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
16.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
15.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
15.5
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
15.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
15.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
14.9
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
14.8
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
14.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
14.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
14.3
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
14.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
14.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
13.7
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
13.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
13.4
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
13.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
12.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
12.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
12.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
11.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
11.4
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
11.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
10.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
10.7
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
10.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
10.2
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
10.2
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
10.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
10.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
10.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
10.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
9.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
9.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
8.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
8.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
8.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
8.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
8.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
8.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
8.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
7.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
7.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
7.3
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
7.2
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
7.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
6.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
6.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
6.6
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
6.4
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
6.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
6.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
5.8
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
5.7
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
5.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
5.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
5.1
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
4.8
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
4.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
3.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
3.4
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
3.0
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.