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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 119.3
Min pTPM: 12.0
Std pTPM: 20.2
Median pTPM: 48.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
119.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
93.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
92.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
92.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
89.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
88.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
85.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
84.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
84.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
83.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
80.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
78.1
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
76.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
76.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
71.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
71.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
71.0
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
68.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
68.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
68.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
67.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
67.2
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
66.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
66.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
65.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
65.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
65.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
65.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
65.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
65.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
64.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
63.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
62.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
62.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
62.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
59.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
57.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
57.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
56.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
56.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
56.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
56.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
56.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
54.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
54.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
54.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
53.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
52.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
52.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
52.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
51.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
51.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
51.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
51.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
51.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
51.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
50.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
50.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
50.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
49.1
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
48.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
48.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
48.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
48.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
47.3
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
47.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
46.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
46.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
46.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
46.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
45.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
45.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
45.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
45.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
44.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
44.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
44.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
43.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
42.8
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
42.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
41.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
41.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
41.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
40.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
40.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
39.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
38.9
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
38.2
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
37.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
36.8
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
36.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
36.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
35.6
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
34.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
33.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
33.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
32.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
32.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
31.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
30.8
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
29.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
28.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
27.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
27.2
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
26.4
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
25.6
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
25.4
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
24.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
24.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
24.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
23.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
22.9
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
22.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
22.5
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
21.3
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
19.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
17.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
17.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
15.6
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
15.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
14.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
12.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
12.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.