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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
897.4
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
5145.3
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
4818.3
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
3554.3
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
3297.2
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
3071.3
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
2839.3
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
2766.7
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
2754.1
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
2706.4
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
2491.8
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
2450.6
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
2367.4
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
2364.7
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
2343.0
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
2300.5
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
2289.6
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
2282.5
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
2176.0
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
2098.8
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
2048.0
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
2038.1
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
2004.2
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
1954.3
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
1941.7
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
1936.3
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
1936.1
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
1910.2
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
1875.2
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
1833.1
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
1831.8
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
1825.6
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
1773.0
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
1763.5
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
1757.7
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
1748.4
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
1738.2
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
1730.8
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
1723.9
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
1711.6
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
1681.5
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
1668.6
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
1666.2
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
1664.4
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
1663.1
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
1649.7
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
1628.6
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
1614.1
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
1603.5
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
1559.2
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
1557.4
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
1557.1
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
1553.5
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
1553.1
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
1546.4
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
1544.4
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
1543.2
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
1527.5
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
1516.4
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
1513.8
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
1509.5
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
1492.1
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
1491.9
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
1483.0
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
1477.8
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
1465.8
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
1430.6
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
1423.3
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
1409.7
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
1405.3
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
1404.9
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
1388.9
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
1371.7
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
1371.6
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
1368.8
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
1366.1
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
1362.5
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
1361.6
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
1360.1
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
1356.4
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
1352.2
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
1341.9
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
1338.5
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
1330.8
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
1325.4
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
1302.2
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
1293.3
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
1290.3
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
1288.5
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
1272.2
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
1265.9
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
1263.1
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
1262.0
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
1255.6
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
1252.7
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
1249.4
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
1241.9
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
1233.3
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
1230.9
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
1215.5
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
1199.1
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
1196.8
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
1169.0
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
1154.3
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
1149.7
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
1145.7
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
1138.5
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
1127.4
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
1120.6
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
1116.5
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
1109.5
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
1108.5
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
1105.7
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
1102.0
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
1099.3
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
1098.1
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
1097.3
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
1095.9
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
1089.2
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
1089.0
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
1083.1
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
1081.6
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
1079.7
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
1072.2
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
1065.5
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
1039.6
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
1037.2
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
1035.0
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
1032.9
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
1031.4
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
1029.7
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
1012.4
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
1005.1
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
995.6
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
994.1
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
993.0
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
992.2
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
990.1
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
987.1
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
985.3
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
976.0
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
968.7
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
964.9
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
961.5
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
960.9
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
959.5
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
959.4
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
956.6
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
953.4
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
953.4
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
953.2
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
939.4
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
939.2
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
937.3
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
935.5
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
926.9
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
922.7
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
915.1
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
914.8
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
912.9
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
910.4
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
909.1
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
903.6
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
902.6
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
902.3
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
894.0
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
894.0
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
892.1
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
886.7
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
885.7
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
885.0
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
882.9
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
881.1
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
880.9
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
880.5
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
872.8
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
871.6
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
869.1
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
863.6
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
858.1
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
852.2
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
848.4
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
848.1
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
841.6
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
841.4
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
839.2
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
838.9
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
838.4
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
835.7
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
834.3
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
834.1
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
829.5
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
827.9
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
827.6
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
826.7
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
823.9
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
822.7
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
815.0
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
814.4
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
814.3
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
807.5
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
803.3
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
800.5
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
794.0
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
793.2
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
785.6
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
782.4
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
782.3
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
779.3
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
773.7
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
768.8
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
755.8
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
753.8
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
753.4
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
753.0
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
751.0
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
743.2
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
742.4
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
738.0
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
735.3
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
734.3
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
731.3
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
730.7
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
729.3
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
724.5
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
722.2
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
720.9
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
700.4
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
695.5
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
691.9
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
688.5
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
683.8
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
681.0
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
668.6
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
661.0
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
658.0
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
650.3
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
647.7
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
640.4
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
638.6
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
635.1
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
634.3
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
628.4
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
627.4
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
623.2
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
612.6
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
608.5
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
604.7
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
601.5
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
598.6
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
598.5
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
596.6
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
591.5
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
585.9
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
585.9
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
581.8
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
579.4
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
579.0
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
574.1
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
573.9
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
571.6
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
571.2
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
569.3
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
567.6
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
564.0
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
562.1
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
560.7
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
560.0
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
558.9
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
555.4
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
553.6
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
553.5
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
552.9
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
548.2
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
547.1
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
544.7
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
542.6
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
536.0
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
522.4
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
517.7
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
514.7
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
510.3
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
501.7
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
501.2
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
493.7
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
491.2
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
490.6
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
489.9
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
485.6
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
484.2
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
479.5
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
474.6
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
466.6
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
462.4
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
462.3
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
462.2
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
459.9
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
459.8
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
459.0
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
457.0
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
456.4
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
454.8
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
450.9
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
448.2
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
440.8
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
438.3
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
437.5
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
436.3
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
432.9
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
431.4
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
429.8
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
420.8
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
420.7
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
417.0
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
410.6
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
408.9
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
406.3
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
404.8
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
404.0
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
401.0
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
394.0
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
392.2
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
389.7
TCGA-HQ-A2OE-01A
male, alive, 1174 days
383.5
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
383.0
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
380.2
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
373.1
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
370.5
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
364.0
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
355.0
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
350.9
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
346.4
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
345.0
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
344.7
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
338.5
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
334.4
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
329.1
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
323.3
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
322.7
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
321.4
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
318.4
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
312.8
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
307.1
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
305.2
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
305.0
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
303.4
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
300.9
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
298.2
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
296.4
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
295.6
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
295.2
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
294.9
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
293.3
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
292.6
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
286.3
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
285.8
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
278.6
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
274.3
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
272.1
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
256.1
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
251.1
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
249.6
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
248.6
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
244.0
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
229.9
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
226.9
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
224.2
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
223.2
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
222.7
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
220.4
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
217.1
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
215.6
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
214.7
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
213.9
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
213.0
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
210.8
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
207.6
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
201.6
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
193.6
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
190.1
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
176.7
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
175.2
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
173.5
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
172.5
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
171.5
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
165.4
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
155.6
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
147.2
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
144.6
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
135.6
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
132.4
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
130.9
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
126.7
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
121.9
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
112.8
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
111.4
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
111.1
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
109.6
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
99.7
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
96.1
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
93.8
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
76.6
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
69.6
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
63.6
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
62.9
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
53.1
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
35.9
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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