We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 18.7
Samples: 160
Max pTPM: 60.7
Min pTPM: 2.0
Std pTPM: 9.6
Median pTPM: 17.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
60.7
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
47.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
42.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
41.3
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
39.4
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
37.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
37.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
36.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
36.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
33.9
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
33.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
32.7
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
32.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
31.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
31.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
30.9
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
30.4
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
30.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
29.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
29.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
28.7
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
28.5
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
28.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
28.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
27.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
27.1
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
27.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
27.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
26.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
26.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
26.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
26.3
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
26.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
26.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
25.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
25.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
25.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
25.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
25.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
24.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
24.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
24.7
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
23.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
23.4
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
23.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
23.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
23.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
23.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
22.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
22.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
22.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
22.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
22.2
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
22.2
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
22.2
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
22.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
22.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
21.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
21.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
21.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
20.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
20.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
20.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
20.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
20.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
20.1
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
20.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
19.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
19.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
19.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
19.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
19.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
19.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
18.9
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
18.7
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
18.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
18.1
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
17.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
17.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
17.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
17.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
17.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
17.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
17.4
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
17.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
17.1
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
16.8
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
16.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
16.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
16.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
16.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
16.2
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
16.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
16.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
15.9
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
15.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
15.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
15.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
15.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
15.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
15.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
15.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
14.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
14.9
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
14.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
14.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
14.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
13.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
13.7
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
13.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
13.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
12.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
12.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
12.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
12.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
12.3
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
12.3
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
11.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
11.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
10.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
10.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
10.5
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
10.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
10.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
10.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
10.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
10.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
9.9
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
9.9
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
9.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
9.6
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
9.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
9.2
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
8.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
8.5
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
8.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
8.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
8.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
7.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
7.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
7.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
7.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
7.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
6.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
6.6
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
6.4
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
6.3
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
6.2
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
6.0
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
6.0
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
5.9
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
5.7
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
5.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
5.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
5.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
4.6
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
4.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
3.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
3.7
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
2.0
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.