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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 162.9
Min pTPM: 2.5
Std pTPM: 25.4
Median pTPM: 20.6
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
162.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
121.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
116.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
68.2
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
65.5
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
58.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
58.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
58.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
57.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
55.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
51.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
47.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
45.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
40.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
39.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
37.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
35.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
34.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
34.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
33.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
32.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
32.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
31.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
31.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
29.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
29.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
29.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
28.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
28.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
27.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
27.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
26.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
26.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
23.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
23.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
22.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
22.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
22.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
22.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
21.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
21.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
21.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
21.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
20.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
20.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
19.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
19.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
19.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
18.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
17.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
17.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
17.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
15.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
15.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
15.3
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
15.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
14.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
14.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
14.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
13.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
13.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
13.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
12.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
12.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
11.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
11.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
11.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
11.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
10.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
10.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
10.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
9.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
9.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
9.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
9.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
9.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
9.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
7.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
7.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
7.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
6.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
6.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
5.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
5.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
4.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
4.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
3.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
2.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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