We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 57.1
Samples: 160
Max pTPM: 204.5
Min pTPM: 19.8
Std pTPM: 21.9
Median pTPM: 53.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
204.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
178.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
112.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
94.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
93.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
91.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
90.4
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
85.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
85.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
84.1
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
83.4
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
82.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
82.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
81.1
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
81.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
79.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
78.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
78.4
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
78.2
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
77.6
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
76.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
75.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
75.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
75.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
73.0
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
72.9
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
72.8
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
72.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
71.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
69.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
69.0
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
69.0
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
68.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
68.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
68.3
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
68.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
67.4
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
66.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
65.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
65.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
65.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
64.0
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
63.9
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
63.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
63.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
62.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
62.7
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
62.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
62.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
62.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
61.8
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
61.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
61.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
61.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
61.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
61.1
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
60.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
60.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
60.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
60.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
60.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
60.3
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
60.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
59.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
59.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
59.6
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
58.9
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
58.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
57.1
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
56.0
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
55.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
54.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
54.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
54.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
54.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
54.0
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
53.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
53.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
53.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
53.1
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
53.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
52.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
52.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
52.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
52.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
52.3
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
52.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
51.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
51.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
50.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
50.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
50.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
50.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
49.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
49.7
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
49.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
49.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
49.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
48.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
48.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
48.4
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
47.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
47.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
47.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
47.0
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
46.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
46.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
46.7
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
46.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
46.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
46.2
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
45.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
45.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
45.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
45.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
44.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
44.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
44.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
44.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
43.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
43.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
43.5
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
43.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
43.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
43.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
42.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
42.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
42.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
41.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
41.9
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
41.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
41.7
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
41.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
41.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
40.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
40.2
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
40.0
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
39.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
39.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
38.4
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
38.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
38.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
37.6
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
37.4
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
37.3
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
37.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
35.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
34.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
34.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
34.4
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
34.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
32.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
32.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
32.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
30.7
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
30.4
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
27.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
27.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
23.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
19.8
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.