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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 51.8
Min pTPM: 5.8
Std pTPM: 9.5
Median pTPM: 24.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
51.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
50.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
46.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
41.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
41.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
41.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
41.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
40.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
39.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
39.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
37.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
37.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
36.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
35.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
34.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
33.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
33.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
33.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
33.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
33.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
33.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
33.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
32.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
32.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
31.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
30.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
30.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
30.2
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
29.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
29.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
29.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
29.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
28.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
28.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
28.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
28.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
28.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
27.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
26.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
25.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
25.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
25.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
25.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
25.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
25.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
25.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
24.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
24.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
24.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
24.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
24.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
24.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
24.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
24.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
23.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
23.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
23.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
23.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
23.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
22.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
22.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
21.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
21.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
21.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
21.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
20.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
20.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
20.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
18.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
18.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
17.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
17.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
17.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
17.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
16.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
16.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
15.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
15.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
15.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
15.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
15.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
14.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
14.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
14.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
14.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
14.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
14.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
13.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
13.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
13.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
12.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
12.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
12.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
11.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
11.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
10.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
7.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
7.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
5.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.