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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 2291.2
Min pTPM: 56.0
Std pTPM: 341.0
Median pTPM: 631.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
2291.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1387.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
1303.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1204.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
1165.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
1123.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
1118.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
1105.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
1099.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1091.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
1084.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1076.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
1021.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
999.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
997.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
980.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
978.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
976.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
972.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
956.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
925.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
922.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
917.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
917.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
914.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
909.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
893.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
887.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
877.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
872.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
863.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
859.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
851.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
826.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
819.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
816.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
811.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
805.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
790.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
785.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
777.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
759.2
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
748.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
737.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
727.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
710.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
678.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
675.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
675.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
639.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
623.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
623.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
619.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
617.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
599.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
597.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
596.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
578.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
574.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
563.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
563.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
562.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
549.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
540.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
528.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
510.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
506.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
503.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
499.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
485.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
451.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
437.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
425.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
419.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
405.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
405.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
398.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
396.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
394.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
394.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
391.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
390.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
375.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
374.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
371.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
363.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
343.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
306.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
290.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
289.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
230.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
204.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
204.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
197.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
194.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
160.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
152.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
85.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
82.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
56.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.