We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 561.4
Min pTPM: 22.6
Std pTPM: 111.1
Median pTPM: 152.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
561.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
476.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
453.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
443.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
405.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
403.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
370.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
334.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
308.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
305.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
304.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
300.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
298.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
296.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
291.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
280.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
272.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
270.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
267.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
266.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
263.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
259.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
257.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
248.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
243.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
239.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
233.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
229.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
223.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
223.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
221.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
212.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
210.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
208.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
203.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
203.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
194.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
190.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
188.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
176.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
173.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
170.4
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
169.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
166.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
164.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
161.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
161.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
160.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
157.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
152.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
152.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
152.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
151.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
147.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
147.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
143.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
136.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
135.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
134.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
133.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
131.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
128.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
125.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
123.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
116.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
114.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
111.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
109.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
109.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
104.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
96.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
96.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
96.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
94.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
94.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
93.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
86.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
70.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
64.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
61.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
61.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
60.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
57.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
55.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
54.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
54.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
52.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
47.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
47.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
47.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
46.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
45.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
41.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
40.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
38.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
36.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
33.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
24.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
22.6
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.