We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 69.4
Samples: 160
Max pTPM: 158.9
Min pTPM: 14.6
Std pTPM: 29.3
Median pTPM: 70.3
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
158.9
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
147.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
129.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
128.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
126.7
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
126.1
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
124.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
122.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
121.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
121.0
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
116.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
115.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
115.2
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
114.9
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
113.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
111.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
111.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
109.8
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
106.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
105.0
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
102.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
101.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
101.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
100.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
98.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
98.6
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
98.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
98.0
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
97.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
96.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
95.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
95.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
93.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
91.0
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
90.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
90.2
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
89.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
88.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
87.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
87.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
86.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
86.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
85.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
83.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
83.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
83.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
83.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
82.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
82.0
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
81.9
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
81.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
80.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
80.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
80.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
80.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
79.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
79.1
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
78.5
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
78.5
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
78.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
78.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
77.0
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
76.7
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
76.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
76.0
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
75.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
75.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
75.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
75.1
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
74.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
74.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
74.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
74.0
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
73.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
73.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
73.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
72.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
72.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
71.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
70.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
69.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
68.7
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
68.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
67.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
67.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
67.4
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
66.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
66.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
66.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
66.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
66.2
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
65.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
65.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
65.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
63.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
63.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
62.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
62.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
61.4
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
59.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
58.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
58.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
58.0
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
57.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
55.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
55.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
54.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
54.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
54.0
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
53.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
53.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
50.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
49.9
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
49.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
49.3
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
48.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
48.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
48.2
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
46.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
46.4
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
43.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
42.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
42.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
42.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
42.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
41.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
41.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
41.2
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
39.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
39.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
38.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
38.4
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
37.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
36.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
36.1
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
35.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
33.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
33.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
32.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
32.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
31.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
31.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
31.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
30.9
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
30.8
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
30.6
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
30.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
29.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
29.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
27.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
27.7
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
27.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
23.8
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
23.3
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
23.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
22.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
20.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
18.9
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
17.7
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
14.6
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.