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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 584.5
Min pTPM: 62.2
Std pTPM: 109.7
Median pTPM: 260.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
584.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
535.6
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
517.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
500.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
478.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
426.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
416.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
413.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
408.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
408.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
403.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
402.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
397.6
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
396.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
393.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
387.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
386.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
381.9
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
381.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
379.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
376.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
369.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
369.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
365.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
364.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
362.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
361.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
353.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
343.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
341.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
340.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
338.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
337.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
336.4
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
335.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
332.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
325.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
322.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
321.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
319.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
318.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
315.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
314.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
306.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
305.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
301.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
296.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
293.5
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
287.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
285.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
284.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
282.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
279.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
274.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
272.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
269.8
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
267.5
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
264.5
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
262.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
262.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
261.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
260.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
256.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
254.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
252.3
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
249.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
246.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
246.3
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
234.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
234.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
231.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
226.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
226.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
219.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
215.8
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
212.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
211.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
208.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
208.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
206.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
202.8
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
202.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
194.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
193.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
192.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
189.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
188.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
186.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
184.8
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
183.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
183.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
179.6
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
178.2
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
176.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
165.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
163.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
159.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
155.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
154.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
151.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
151.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
151.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
146.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
145.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
133.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
132.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
128.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
128.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
127.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
124.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
123.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
122.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
119.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
117.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
116.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
108.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
91.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
90.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
84.5
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
82.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
72.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
65.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
62.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.