We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 34.6
Samples: 160
Max pTPM: 94.7
Min pTPM: 3.3
Std pTPM: 19.3
Median pTPM: 33.2
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
94.7
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
94.7
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
91.9
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
77.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
76.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
74.8
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
70.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
69.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
68.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
67.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
63.7
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
60.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
60.2
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
60.1
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
59.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
59.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
58.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
57.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
57.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
57.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
57.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
56.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
56.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
54.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
54.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
54.5
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
54.5
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
54.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
53.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
53.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
53.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
53.1
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
52.4
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
51.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
50.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
50.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
49.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
49.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
48.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
47.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
47.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
46.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
45.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
44.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
44.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
44.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
44.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
43.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
43.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
43.3
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
43.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
43.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
43.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
42.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
42.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
41.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
40.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
40.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
40.2
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
40.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
39.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
39.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
39.5
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
38.9
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
37.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
37.5
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
37.3
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
36.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
36.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
36.7
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
35.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
35.5
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
35.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
35.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
35.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
34.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
34.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
33.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
33.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
33.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
33.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
32.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
32.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
32.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
31.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
30.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
30.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
29.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
29.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
28.4
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
28.3
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
27.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
27.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
27.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
27.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
27.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
26.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
26.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
26.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
26.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
26.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
25.1
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
24.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
24.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
24.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
24.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
23.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
23.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
23.5
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
22.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
22.1
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
21.8
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
21.8
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
21.4
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
20.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
19.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
19.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
19.3
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
19.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
18.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
18.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
17.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
17.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
17.4
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
16.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
16.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
16.2
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
15.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
15.2
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
15.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
14.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
14.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
13.9
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
13.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
13.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
13.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
13.3
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
13.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
13.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
12.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
12.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
12.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
12.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
11.7
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
10.6
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
10.5
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
10.3
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
10.1
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
9.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
9.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
9.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
9.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
8.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
8.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
7.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
5.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
5.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
5.7
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
4.2
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
3.3
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.