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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERPINC1 is prognostic, high expression is favourable in liver cancer
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
1504.0
Number of samples
365
Samples
Sample
Description
FPKM
TCGA-ZS-A9CE-01A
79 years, female, white, stage:ii, alive, 1241 days
6154.6
TCGA-G3-A5SI-01A
44 years, male, asian, stage:ii, dead, 768 days
6132.7
TCGA-DD-AACF-01A
68 years, male, asian, stage:i, dead, 365 days
6109.8
TCGA-DD-AADY-01A
55 years, female, asian, stage:i, alive, 555 days
6100.8
TCGA-DD-AAVY-01A
56 years, male, asian, stage:iiia, alive, 1970 days
5366.0
TCGA-DD-A3A8-01A
75 years, male, white, stage:ii, dead, 11 days
4513.7
TCGA-G3-AAV2-01A
50 years, male, white, stage:i, alive, 372 days
4442.4
TCGA-ZP-A9D0-01A
67 years, female, black or african american, alive, 1091 days
4437.0
TCGA-DD-AADF-01A
64 years, female, asian, stage:i, dead, 115 days
4288.0
TCGA-LG-A6GG-01A
79 years, female, white, stage:ii, alive, 387 days
4120.8
TCGA-DD-AACV-01A
53 years, male, asian, stage:i, alive, 1531 days
4062.9
TCGA-DD-AAE3-01A
50 years, male, asian, stage:i, alive, 566 days
4057.7
TCGA-DD-A11C-01A
69 years, male, white, stage:i, alive, 662 days
3994.7
TCGA-DD-AADG-01A
70 years, male, asian, stage:iiia, alive, 1145 days
3938.9
TCGA-DD-A4NK-01A
80 years, female, white, stage:iiia, dead, 1210 days
3922.2
TCGA-DD-AADM-01A
58 years, male, asian, stage:ii, dead, 12 days
3864.6
TCGA-BC-A10Y-01A
76 years, male, white, dead, 711 days
3847.5
TCGA-HP-A5N0-01A
88 years, female, dead, 1147 days
3837.9
TCGA-2Y-A9H9-01A
70 years, male, white, stage:i, alive, 697 days
3828.4
TCGA-G3-A6UC-01A
65 years, male, white, stage:iiib, alive, 671 days
3753.5
TCGA-2Y-A9HB-01A
66 years, male, stage:i, alive, 260 days
3751.5
TCGA-DD-A1EB-01A
72 years, female, stage:i, alive, 2017 days
3737.6
TCGA-DD-AACE-01A
62 years, male, asian, stage:i, alive, 2184 days
3737.2
TCGA-CC-A7IH-01A
58 years, male, asian, stage:iiia, alive, 365 days
3667.1
TCGA-DD-AAVP-01A
48 years, male, asian, stage:i, alive, 2752 days
3646.0
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:i, dead, 438 days
3627.1
TCGA-DD-A11D-01A
57 years, female, white, stage:i, dead, 1560 days
3573.7
TCGA-DD-AACJ-01A
75 years, male, asian, stage:ii, alive, 2102 days
3533.3
TCGA-RC-A7SK-01A
59 years, male, asian, stage:i, alive, 472 days
3423.5
TCGA-5R-AA1C-01A
57 years, male, white, stage:ii, alive, 520 days
3380.7
TCGA-DD-A11B-01A
73 years, male, white, stage:i, dead, 14 days
3376.4
TCGA-ZP-A9D1-01A
56 years, female, white, alive, 21 days
3349.4
TCGA-DD-AAE4-01A
49 years, female, asian, stage:i, alive, 608 days
3321.2
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:ii, dead, 848 days
3245.3
TCGA-FV-A2QR-01A
male, white, stage:i, dead, 581 days
3221.0
TCGA-G3-A3CG-01A
80 years, male, white, stage:i, alive, 673 days
3092.6
TCGA-DD-AAEH-01A
73 years, male, asian, stage:i, alive, 784 days
3041.3
TCGA-DD-AADA-01A
66 years, female, asian, stage:i, alive, 1233 days
3014.9
TCGA-CC-A7IL-01A
61 years, male, asian, stage:iiia, dead, 278 days
3002.8
TCGA-DD-AADP-01A
45 years, male, asian, stage:i, alive, 458 days
2987.2
TCGA-DD-A73B-01A
72 years, female, white, stage:i, dead, 283 days
2979.0
TCGA-DD-A73D-01A
68 years, female, white, stage:ii, alive, 693 days
2901.1
TCGA-EP-A3JL-01A
76 years, male, white, stage:i, alive, 303 days
2896.2
TCGA-G3-AAV0-01A
58 years, male, asian, stage:i, alive, 476 days
2886.2
TCGA-DD-AAC9-01A
51 years, male, asian, stage:i, alive, 347 days
2866.4
TCGA-ED-A7XO-01A
29 years, male, asian, stage:iiia, alive, 427 days
2858.4
TCGA-DD-AAW1-01A
55 years, male, asian, stage:iiia, alive, 1989 days
2807.6
TCGA-ZS-A9CG-01A
55 years, male, white, stage:ii, alive, 341 days
2793.0
TCGA-BC-A10T-01A
76 years, male, white, dead, 837 days
2773.7
TCGA-ZP-A9CV-01A
59 years, male, white, dead, 1088 days
2765.2
TCGA-DD-A73C-01A
65 years, female, white, stage:iiia, alive, 701 days
2717.9
TCGA-BC-A69I-01A
69 years, male, white, stage:i, alive, 387 days
2702.9
TCGA-G3-A5SK-01A
58 years, male, white, stage:i, alive, 744 days
2696.2
TCGA-G3-AAV4-01A
83 years, female, white, stage:i, dead, 27 days
2694.1
TCGA-DD-A119-01A
40 years, male, asian, stage:iv, dead, 223 days
2671.4
TCGA-XR-A8TF-01A
74 years, male, white, stage:i, dead, 693 days
2622.1
TCGA-DD-AAW2-01A
69 years, male, asian, stage:i, alive, 1855 days
2611.1
TCGA-DD-A4NO-01A
66 years, male, white, stage:i, alive, 2245 days
2593.6
TCGA-DD-AAE9-01A
69 years, male, asian, stage:i, alive, 722 days
2592.2
TCGA-G3-A7M5-01A
76 years, male, asian, stage:i, alive, 447 days
2581.1
TCGA-G3-A5SL-01A
70 years, male, white, stage:ii, alive, 621 days
2565.5
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:iiib, alive, 396 days
2562.5
TCGA-FV-A496-01A
84 years, female, white, stage:i, alive, 10 days
2536.9
TCGA-FV-A495-01A
51 years, female, white, stage:ii, alive, 1 days
2526.8
TCGA-DD-A39V-01A
77 years, male, white, stage:ii, dead, 643 days
2487.0
TCGA-DD-A4NI-01A
67 years, male, white, stage:ii, alive, 816 days
2481.2
TCGA-DD-A3A5-01A
66 years, female, white, stage:iii, dead, 3125 days
2461.0
TCGA-UB-A7ME-01A
51 years, male, asian, stage:i, alive, 486 days
2457.3
TCGA-G3-A5SM-01A
58 years, male, white, stage:ii, alive, 520 days
2453.1
TCGA-DD-A4NF-01A
72 years, male, white, stage:i, alive, 942 days
2447.8
TCGA-G3-A25Z-01A
58 years, male, asian, stage:i, alive, 655 days
2376.1
TCGA-DD-AACY-01A
61 years, male, asian, stage:i, alive, 1450 days
2373.9
TCGA-DD-AAEG-01A
59 years, female, asian, stage:i, alive, 719 days
2361.1
TCGA-G3-AAV3-01A
58 years, female, white, stage:ii, alive, 412 days
2350.3
TCGA-FV-A2QQ-01A
80 years, male, white, stage:i, alive, 729 days
2322.8
TCGA-BC-A5W4-01A
69 years, male, white, stage:iiia, dead, 547 days
2320.9
TCGA-T1-A6J8-01A
68 years, male, white, alive, 23 days
2297.2
TCGA-LG-A9QC-01A
48 years, male, white, stage:i, alive, 425 days
2279.9
TCGA-DD-A115-01A
53 years, male, white, stage:iiia, dead, 2542 days
2270.7
TCGA-G3-A25S-01A
64 years, male, white, stage:i, dead, 416 days
2255.7
TCGA-DD-AAW3-01A
69 years, male, asian, stage:i, alive, 1633 days
2255.6
TCGA-CC-A5UE-01A
48 years, male, asian, stage:iiib, dead, 272 days
2247.6
TCGA-G3-A7M8-01A
31 years, male, asian, stage:i, alive, 430 days
2233.6
TCGA-ZS-A9CF-01A
64 years, male, white, stage:ii, alive, 2412 days
2229.0
TCGA-RC-A7SB-01A
53 years, male, asian, stage:ii, alive, 588 days
2227.1
TCGA-EP-A12J-01A
63 years, male, black or african american, stage:i, alive, 570 days
2224.7
TCGA-DD-A1EG-01A
77 years, male, white, stage:i, dead, 1372 days
2218.5
TCGA-DD-AADV-01A
50 years, male, asian, stage:i, alive, 574 days
2210.7
TCGA-2Y-A9GU-01A
55 years, female, white, stage:i, alive, 1939 days
2198.2
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:ii, alive, 594 days
2149.2
TCGA-DD-AAD0-01A
73 years, female, asian, stage:i, alive, 137 days
2146.3
TCGA-RC-A6M4-01A
74 years, female, white, stage:iiia, alive, 22 days
2146.0
TCGA-DD-A11A-01A
67 years, male, black or african american, stage:i, alive, 79 days
2141.9
TCGA-DD-AADU-01A
60 years, male, asian, stage:ii, alive, 554 days
2134.0
TCGA-K7-A6G5-01A
66 years, male, white, stage:i, alive, 512 days
2129.7
TCGA-G3-A3CH-01A
53 years, male, asian, stage:iiia, alive, 780 days
2105.5
TCGA-MI-A75E-01A
61 years, male, white, stage:iiic, alive, 507 days
2105.4
TCGA-UB-A7MB-01A
24 years, male, white, stage:ii, alive, 601 days
2097.2
TCGA-EP-A26S-01A
70 years, male, white, stage:i, alive, 608 days
2059.4
TCGA-DD-AAE2-01A
51 years, male, asian, stage:i, alive, 638 days
2051.0
TCGA-ZP-A9CY-01A
66 years, female, white, alive, 782 days
2050.2
TCGA-G3-AAV5-01A
67 years, male, white, stage:ii, alive, 354 days
2039.5
TCGA-ED-A4XI-01A
58 years, male, asian, stage:ii, alive, 819 days
2026.9
TCGA-DD-AACS-01A
39 years, male, asian, stage:i, alive, 1804 days
2018.6
TCGA-DD-AAW0-01A
54 years, male, asian, stage:i, alive, 2015 days
2015.4
TCGA-2Y-A9GS-01A
58 years, male, white, dead, 724 days
2013.2
TCGA-2Y-A9GW-01A
64 years, male, white, stage:i, dead, 1271 days
1987.1
TCGA-DD-AAEB-01A
60 years, male, asian, stage:i, alive, 478 days
1980.6
TCGA-CC-A7IF-01A
59 years, male, asian, stage:iiia, dead, 649 days
1978.0
TCGA-DD-AADL-01A
58 years, male, asian, stage:i, alive, 636 days
1967.4
TCGA-DD-AACT-01A
69 years, female, asian, stage:i, alive, 1562 days
1959.6
TCGA-DD-AAVV-01A
56 years, male, asian, stage:ii, alive, 2455 days
1953.3
TCGA-DD-A3A1-01A
65 years, male, stage:iiia, dead, 233 days
1942.7
TCGA-BC-A10U-01A
69 years, male, white, dead, 837 days
1940.0
TCGA-DD-AAE6-01A
59 years, female, asian, stage:i, alive, 141 days
1904.8
TCGA-MI-A75G-01A
63 years, male, white, stage:ii, alive, 698 days
1894.4
TCGA-DD-A3A2-01A
76 years, female, white, stage:i, dead, 2131 days
1876.6
TCGA-HP-A5MZ-01A
62 years, male, stage:i, dead, 91 days
1869.9
TCGA-G3-A25U-01A
63 years, female, asian, stage:i, alive, 1636 days
1865.0
TCGA-BD-A2L6-01A
69 years, male, white, alive, 1363 days
1862.2
TCGA-NI-A4U2-01A
71 years, male, white, stage:iiia, dead, 1791 days
1852.5
TCGA-KR-A7K2-01A
64 years, male, white, stage:i, alive, 829 days
1850.4
TCGA-2Y-A9H6-01A
68 years, female, white, stage:i, alive, 357 days
1817.0
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:i, alive, 1900 days
1811.1
TCGA-2Y-A9H1-01A
58 years, male, white, stage:i, dead, 1229 days
1808.9
TCGA-MI-A75H-01A
77 years, male, white, alive, 747 days
1784.3
TCGA-DD-AADD-01A
51 years, male, asian, stage:i, alive, 1231 days
1769.6
TCGA-XR-A8TC-01A
43 years, female, white, stage:i, alive, 1339 days
1767.5
TCGA-ED-A8O5-01A
59 years, female, asian, stage:iiia, alive, 406 days
1767.3
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:iiia, alive, 20 days
1766.0
TCGA-DD-A116-01A
68 years, male, asian, stage:iiia, dead, 1622 days
1760.9
TCGA-5R-AAAM-01A
65 years, female, white, stage:ii, dead, 46 days
1759.0
TCGA-4R-AA8I-01A
66 years, male, white, stage:ii, dead, 262 days
1754.5
TCGA-DD-AACO-01A
40 years, male, asian, stage:i, alive, 1876 days
1751.1
TCGA-G3-AAUZ-01A
48 years, male, stage:i, alive, 480 days
1748.6
TCGA-ZP-A9D4-01A
64 years, female, white, alive, 395 days
1748.5
TCGA-G3-A3CK-01A
61 years, male, asian, stage:i, alive, 585 days
1747.5
TCGA-XR-A8TG-01A
59 years, male, white, stage:i, alive, 898 days
1730.1
TCGA-DD-AAVR-01A
44 years, male, asian, stage:i, alive, 2513 days
1722.5
TCGA-DD-AADR-01A
58 years, male, asian, stage:i, alive, 2028 days
1714.8
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:i, dead, 19 days
1714.0
TCGA-K7-A5RF-01A
64 years, male, white, stage:i, alive, 631 days
1713.0
TCGA-DD-AAEI-01A
72 years, male, asian, stage:i, alive, 1531 days
1704.0
TCGA-2Y-A9GT-01A
51 years, male, white, stage:i, dead, 1624 days
1701.8
TCGA-ES-A2HS-01A
80 years, male, white, stage:i, dead, 688 days
1692.8
TCGA-G3-A3CI-01A
71 years, male, white, stage:i, alive, 180 days
1688.7
TCGA-GJ-A6C0-01A
75 years, female, white, stage:ii, dead, 31 days
1688.0
TCGA-ED-A7PY-01A
20 years, female, asian, stage:ii, alive, 390 days
1687.1
TCGA-KR-A7K0-01A
65 years, male, white, stage:i, dead, 65 days
1686.4
TCGA-WX-AA46-01A
62 years, male, white, stage:ii, alive, 756 days
1668.8
TCGA-DD-AAE7-01A
72 years, male, asian, stage:i, alive, 644 days
1661.8
TCGA-2Y-A9GV-01A
54 years, female, white, stage:i, dead, 2532 days
1656.7
TCGA-DD-AAVU-01A
46 years, male, asian, stage:ii, alive, 2202 days
1647.1
TCGA-UB-A7MC-01A
59 years, male, white, stage:iiia, alive, 500 days
1645.3
TCGA-CC-A3MB-01A
36 years, male, asian, stage:iiia, dead, 315 days
1616.3
TCGA-DD-AACC-01A
61 years, male, asian, stage:i, dead, 1685 days
1576.6
TCGA-DD-A1EA-01A
68 years, male, asian, stage:ii, alive, 2415 days
1509.2
TCGA-DD-AADK-01A
68 years, female, asian, stage:ii, alive, 1049 days
1508.3
TCGA-BC-A110-01A
51 years, female, black or african american, dead, 2116 days
1507.7
TCGA-BC-A10X-01A
52 years, female, white, stage:iiia, dead, 770 days
1504.9
TCGA-DD-AAD3-01A
43 years, male, asian, stage:i, alive, 1295 days
1504.7
TCGA-EP-A3RK-01A
73 years, male, white, stage:iiia, alive, 363 days
1469.5
TCGA-DD-AAD2-01A
66 years, male, asian, stage:i, alive, 658 days
1442.5
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:i, dead, 52 days
1432.0
TCGA-MR-A520-01A
58 years, male, white, stage:i, alive, 229 days
1405.0
TCGA-ZP-A9CZ-01A
72 years, male, asian, alive, 706 days
1398.3
TCGA-DD-AACW-01A
43 years, male, asian, stage:i, alive, 1424 days
1389.8
TCGA-WQ-AB4B-01A
62 years, male, white, stage:ii, alive, 395 days
1387.8
TCGA-G3-AAV1-01A
51 years, male, asian, stage:iiic, dead, 359 days
1387.4
TCGA-BC-A217-01A
75 years, female, white, stage:ii, dead, 1397 days
1378.6
TCGA-CC-A7IK-01A
59 years, male, asian, stage:iiia, dead, 262 days
1369.9
TCGA-2Y-A9H8-01A
85 years, female, white, dead, 633 days
1366.9
TCGA-UB-AA0V-01A
69 years, female, white, stage:i, alive, 314 days
1356.2
TCGA-ZS-A9CD-01A
73 years, male, white, stage:ii, dead, 1386 days
1348.4
TCGA-EP-A2KB-01A
46 years, female, white, stage:i, dead, 596 days
1343.5
TCGA-MI-A75C-01A
64 years, male, white, stage:i, alive, 291 days
1338.8
TCGA-ED-A7XP-01A
53 years, female, asian, stage:ii, alive, 400 days
1338.6
TCGA-DD-AADS-01A
63 years, male, asian, stage:i, alive, 474 days
1338.3
TCGA-DD-AAEE-01A
55 years, male, asian, stage:i, alive, 810 days
1337.1
TCGA-LG-A9QD-01A
68 years, male, white, stage:iiia, alive, 366 days
1330.5
TCGA-DD-AAVW-01A
35 years, male, asian, stage:i, alive, 2317 days
1329.0
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:i, alive, 1452 days
1313.8
TCGA-DD-AAD8-01A
73 years, female, asian, stage:i, alive, 1219 days
1307.7
TCGA-DD-AAVS-01A
56 years, male, asian, stage:i, alive, 1823 days
1305.2
TCGA-O8-A75V-01A
54 years, male, stage:i, alive, 538 days
1304.9
TCGA-GJ-A9DB-01A
68 years, male, white, stage:i, dead, 67 days
1282.1
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:i, alive, 519 days
1282.0
TCGA-BD-A3ER-01A
62 years, male, white, stage:ii, alive, 1115 days
1281.2
TCGA-DD-A4NJ-01A
54 years, female, white, stage:ii, alive, 928 days
1278.4
TCGA-BC-A3KF-01A
66 years, female, white, stage:i, alive, 8 days
1265.4
TCGA-FV-A3I1-01A
female, white, stage:ii, dead, 247 days
1265.3
TCGA-DD-AAEK-01A
51 years, male, asian, stage:ii, alive, 1067 days
1255.4
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:ii, alive, 94 days
1200.6
TCGA-CC-A9FS-01A
55 years, male, asian, stage:ii, alive, 211 days
1191.1
TCGA-2Y-A9H0-01A
49 years, male, white, stage:iiia, alive, 3675 days
1189.7
TCGA-BC-A10W-01A
50 years, male, asian, dead, 91 days
1180.7
TCGA-DD-A4NP-01A
32 years, male, white, stage:i, alive, 3308 days
1165.4
TCGA-DD-A73F-01A
77 years, female, white, stage:i, alive, 1085 days
1159.8
TCGA-BC-A10S-01A
81 years, male, white, dead, 1423 days
1146.0
TCGA-DD-AAEA-01A
65 years, male, asian, stage:i, alive, 575 days
1138.6
TCGA-DD-AACI-01A
69 years, male, asian, stage:ii, alive, 1618 days
1138.2
TCGA-DD-A4NV-01A
61 years, male, white, stage:iiia, alive, 2398 days
1123.0
TCGA-DD-A4NL-01A
46 years, male, white, stage:i, alive, 1711 days
1120.9
TCGA-DD-A39Z-01A
43 years, female, stage:ii, dead, 601 days
1109.6
TCGA-KR-A7K8-01A
57 years, male, stage:i, alive, 906 days
1107.6
TCGA-DD-A73A-01A
71 years, male, white, stage:i, alive, 728 days
1087.3
TCGA-UB-AA0U-01A
60 years, male, white, stage:ii, alive, 327 days
1083.9
TCGA-DD-A4NS-01A
62 years, female, white, stage:i, dead, 2456 days
1043.0
TCGA-5C-A9VH-01A
70 years, male, white, stage:i, alive, 322 days
1039.1
TCGA-FV-A3R2-01A
75 years, male, white, stage:i, dead, 194 days
1032.7
TCGA-G3-A25V-01A
68 years, male, white, stage:i, alive, 860 days
1032.6
TCGA-DD-AACQ-01A
50 years, male, asian, stage:ii, dead, 432 days
1021.9
TCGA-2Y-A9H5-01A
59 years, female, white, stage:i, dead, 555 days
1001.1
TCGA-DD-A39W-01A
29 years, female, white, stage:iii, dead, 827 days
1000.0
TCGA-DD-AAVX-01A
38 years, male, asian, stage:ii, alive, 1570 days
984.9
TCGA-DD-AADQ-01A
59 years, male, asian, stage:ii, alive, 436 days
979.9
TCGA-MI-A75I-01A
61 years, male, black or african american, alive, 630 days
968.5
TCGA-DD-A73G-01A
73 years, female, white, stage:i, alive, 3478 days
968.0
TCGA-RC-A7SF-01A
66 years, male, asian, stage:i, alive, 579 days
966.6
TCGA-DD-AAE1-01A
52 years, male, asian, stage:i, alive, 552 days
955.7
TCGA-2Y-A9GX-01A
68 years, male, white, stage:i, alive, 2442 days
955.5
TCGA-DD-A3A3-01A
45 years, male, asian, stage:i, dead, 535 days
952.2
TCGA-DD-A1ED-01A
68 years, male, white, stage:i, alive, 2301 days
951.5
TCGA-DD-A4NE-01A
75 years, female, white, stage:iiia, dead, 660 days
936.9
TCGA-DD-A1EE-01A
73 years, male, white, stage:iiia, dead, 349 days
933.5
TCGA-CC-A3MC-01A
54 years, male, asian, stage:iiia, alive, 363 days
926.9
TCGA-DD-A73E-01A
66 years, male, white, stage:i, alive, 44 days
915.3
TCGA-ED-A627-01A
74 years, male, white, stage:i, alive, 423 days
911.4
TCGA-DD-AACU-01A
59 years, male, asian, stage:i, alive, 1567 days
908.9
TCGA-DD-A3A9-01A
64 years, female, white, stage:ivb, dead, 931 days
908.1
TCGA-NI-A8LF-01A
74 years, male, white, stage:i, alive, 799 days
904.1
TCGA-DD-AACN-01A
32 years, male, asian, stage:i, alive, 1302 days
893.4
TCGA-2Y-A9H7-01A
81 years, female, white, stage:i, alive, 1168 days
889.4
TCGA-CC-A5UC-01A
63 years, male, asian, stage:iiia, dead, 347 days
889.0
TCGA-G3-A7M7-01A
65 years, male, white, stage:i, alive, 361 days
877.0
TCGA-BC-A216-01A
62 years, female, white, stage:iiia, alive, 1351 days
872.2
TCGA-DD-AACK-01A
70 years, male, asian, stage:i, alive, 9 days
871.1
TCGA-CC-A8HU-01A
39 years, female, asian, stage:iiia, dead, 344 days
865.1
TCGA-5C-AAPD-01A
61 years, male, asian, stage:ii, alive, 20 days
854.8
TCGA-DD-A1EH-01A
23 years, male, white, stage:iii, alive, 1495 days
817.5
TCGA-CC-5262-01A
67 years, male, asian, stage:iiic, dead, 103 days
813.5
TCGA-DD-AACD-01A
48 years, male, asian, stage:i, dead, 381 days
809.0
TCGA-DD-A39X-01A
78 years, female, white, stage:i, dead, 1694 days
795.3
TCGA-EP-A2KA-01A
52 years, female, white, stage:iiia, dead, 627 days
787.6
TCGA-2Y-A9H3-01A
45 years, male, white, stage:ii, alive, 1516 days
773.3
TCGA-DD-AADC-01A
53 years, male, asian, stage:i, dead, 425 days
769.7
TCGA-DD-A4NR-01A
85 years, female, white, stage:i, dead, 9 days
767.1
TCGA-GJ-A3OU-01A
59 years, male, white, stage:i, alive, 879 days
766.8
TCGA-BC-A10R-01A
66 years, female, white, dead, 308 days
764.1
TCGA-DD-AAD1-01A
51 years, female, asian, stage:i, alive, 564 days
762.0
TCGA-DD-AAD6-01A
66 years, male, asian, stage:iiia, alive, 672 days
748.1
TCGA-DD-A1EF-01A
57 years, female, white, stage:i, dead, 394 days
743.1
TCGA-DD-AAC8-01A
72 years, male, asian, stage:i, dead, 16 days
741.2
TCGA-DD-AADJ-01A
70 years, female, asian, stage:i, alive, 1066 days
738.5
TCGA-DD-AACX-01A
66 years, male, asian, stage:ii, alive, 170 days
723.3
TCGA-WX-AA44-01A
64 years, female, white, stage:i, alive, 615 days
713.0
TCGA-FV-A23B-01A
70 years, female, white, stage:ii, dead, 1852 days
710.0
TCGA-DD-AACB-01A
74 years, female, asian, stage:i, alive, 2324 days
709.7
TCGA-DD-AACP-01A
65 years, male, asian, stage:i, alive, 415 days
706.4
TCGA-DD-A4ND-01A
56 years, female, white, stage:i, alive, 2746 days
704.2
TCGA-DD-A3A7-01A
67 years, male, stage:iiib, dead, 419 days
702.7
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:ii, dead, 415 days
692.1
TCGA-BC-A8YO-01A
66 years, female, white, stage:iiic, alive, 562 days
688.1
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:i, alive, 2728 days
687.5
TCGA-DD-AACA-01A
65 years, male, asian, stage:i, alive, 2301 days
683.4
TCGA-KR-A7K7-01A
61 years, female, white, stage:ii, alive, 951 days
674.3
TCGA-CC-A9FW-01A
68 years, male, asian, stage:iiia, alive, 248 days
670.1
TCGA-DD-A1EK-01A
64 years, female, white, stage:ivb, dead, 558 days
661.1
TCGA-PD-A5DF-01A
58 years, female, white, stage:iiib, dead, 639 days
645.3
TCGA-UB-A7MF-01A
57 years, male, white, stage:iiia, dead, 214 days
635.6
TCGA-DD-A113-01A
55 years, female, white, stage:ii, alive, 2425 days
621.7
TCGA-DD-A4NG-01A
77 years, male, white, stage:iiia, dead, 802 days
621.4
TCGA-DD-A118-01A
77 years, female, white, stage:ii, alive, 3437 days
610.2
TCGA-XR-A8TE-01A
16 years, male, white, stage:iiia, alive, 925 days
589.2
TCGA-DD-A4NN-01A
56 years, female, white, stage:i, dead, 899 days
588.9
TCGA-ED-A8O6-01A
50 years, female, asian, stage:iiia, dead, 56 days
578.1
TCGA-BD-A3EP-01A
76 years, female, black or african american, stage:i, alive, 409 days
577.6
TCGA-RC-A7S9-01A
47 years, female, asian, stage:i, alive, 640 days
566.3
TCGA-DD-A3A4-01A
37 years, male, white, stage:iiia, dead, 612 days
566.2
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:ii, alive, 1098 days
564.8
TCGA-2Y-A9GY-01A
64 years, female, white, stage:ii, dead, 757 days
559.7
TCGA-CC-5259-01A
60 years, female, asian, stage:iiic, alive, 250 days
557.1
TCGA-DD-A1EI-01A
46 years, male, asian, stage:i, alive, 183 days
557.0
TCGA-CC-5261-01A
44 years, male, asian, stage:ii, dead, 97 days
553.2
TCGA-DD-AACZ-01A
63 years, female, asian, stage:i, dead, 171 days
547.2
TCGA-XR-A8TD-01A
49 years, female, white, stage:iiib, alive, 1030 days
543.4
TCGA-DD-AACH-01A
69 years, male, asian, stage:ii, dead, 195 days
535.0
TCGA-DD-A4NQ-01A
60 years, male, white, stage:ii, dead, 373 days
529.1
TCGA-DD-AADN-01A
59 years, male, asian, stage:i, alive, 898 days
468.2
TCGA-G3-AAV6-01A
53 years, female, white, stage:iiia, dead, 65 days
467.0
TCGA-2Y-A9HA-01A
70 years, male, white, stage:ii, dead, 36 days
441.2
TCGA-ED-A66X-01A
35 years, male, asian, stage:iiia, alive, 406 days
435.7
TCGA-WJ-A86L-01A
68 years, female, white, stage:i, alive, 345 days
425.9
TCGA-FV-A3R3-01A
38 years, female, white, stage:i, dead, 366 days
403.0
TCGA-DD-A39Y-01A
67 years, male, asian, stage:i, dead, 171 days
397.6
TCGA-CC-5264-01A
71 years, male, asian, stage:iiia, dead, 102 days
389.1
TCGA-DD-AACG-01A
52 years, male, asian, stage:ii, dead, 469 days
381.3
TCGA-DD-AAED-01A
51 years, male, asian, stage:i, alive, 763 days
380.6
TCGA-DD-AADI-01A
43 years, female, asian, stage:i, alive, 1085 days
379.6
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:i, alive, 12 days
374.5
TCGA-RC-A7SH-01A
42 years, male, asian, stage:ii, alive, 468 days
360.4
TCGA-CC-5258-01A
48 years, male, asian, stage:ii, dead, 129 days
347.2
TCGA-BC-A10Z-01A
62 years, female, white, stage:i, dead, 34 days
332.7
TCGA-CC-A123-01A
24 years, female, asian, stage:iiia, alive, 219 days
332.4
TCGA-CC-A8HT-01A
74 years, male, asian, stage:iiia, dead, 140 days
327.2
TCGA-BC-A3KG-01A
68 years, female, white, stage:ii, alive, 680 days
320.0
TCGA-DD-AADW-01A
48 years, male, asian, stage:i, alive, 587 days
307.5
TCGA-CC-A8HS-01A
18 years, male, asian, stage:iiic, dead, 300 days
301.6
TCGA-DD-A1EJ-01A
71 years, female, white, stage:iiic, dead, 1005 days
289.2
TCGA-ED-A459-01A
47 years, male, asian, stage:ii, alive, 910 days
287.3
TCGA-DD-AADO-01A
55 years, male, asian, stage:i, alive, 453 days
273.1
TCGA-ED-A66Y-01A
51 years, female, asian, stage:iiia, dead, 296 days
261.4
TCGA-G3-A5SJ-01A
59 years, male, white, stage:i, alive, 698 days
253.4
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:ii, alive, 6 days
252.3
TCGA-G3-A7M6-01A
60 years, female, white, stage:i, alive, 632 days
250.8
TCGA-G3-A25Y-01A
52 years, female, asian, stage:i, dead, 452 days
247.4
TCGA-2Y-A9H2-01A
64 years, female, white, stage:i, alive, 1731 days
226.2
TCGA-DD-AADB-01A
51 years, male, asian, stage:i, alive, 1242 days
223.8
TCGA-CC-A7IE-01A
57 years, male, asian, stage:iiia, dead, 217 days
208.9
TCGA-DD-AACL-01A
66 years, female, asian, stage:i, dead, 107 days
208.4
TCGA-ED-A97K-01A
54 years, male, asian, stage:iiia, alive, 6 days
203.9
TCGA-5C-A9VG-01A
58 years, male, white, stage:ii, alive, 328 days
193.9
TCGA-DD-A4NB-01A
25 years, male, white, stage:i, alive, 989 days
153.8
TCGA-DD-A4NH-01A
65 years, female, white, stage:iiib, alive, 917 days
142.5
TCGA-RC-A6M5-01A
20 years, female, white, stage:iva, alive, 15 days
138.2
TCGA-WX-AA47-01A
33 years, female, white, stage:iiia, dead, 556 days
135.1
TCGA-BC-A69H-01A
64 years, male, white, stage:ii, alive, 444 days
132.4
TCGA-DD-A114-01A
42 years, male, black or african american, stage:ii, dead, 1149 days
127.7
TCGA-5R-AA1D-01A
17 years, female, white, stage:iiia, alive, 449 days
117.2
TCGA-BC-4073-01B
73 years, male, white, stage:iiia, alive, 849 days
109.8
TCGA-RC-A6M6-01A
75 years, male, white, stage:ii, alive, 9 days
101.2
TCGA-CC-A8HV-01A
51 years, female, asian, stage:ii, dead, 279 days
98.9
TCGA-G3-A25T-01A
45 years, female, white, stage:iiia, alive, 1553 days
95.7
TCGA-CC-A5UD-01A
45 years, male, asian, stage:iiia, dead, 304 days
89.8
TCGA-CC-A3MA-01A
61 years, male, asian, stage:iiia, dead, 303 days
85.1
TCGA-WQ-A9G7-01A
female, white, alive, 30 days
81.7
TCGA-UB-A7MA-01A
62 years, female, white, stage:ii, alive, 848 days
74.0
TCGA-YA-A8S7-01A
69 years, male, white, stage:iiia, dead, 412 days
73.8
TCGA-K7-AAU7-01A
61 years, male, white, stage:ii, alive, 359 days
70.2
TCGA-FV-A4ZP-01A
78 years, male, white, stage:iiia, dead, 2486 days
58.8
TCGA-ED-A5KG-01A
60 years, female, asian, stage:ii, alive, 854 days
53.4
TCGA-MR-A8JO-01A
34 years, male, white, stage:i, alive, 330 days
49.1
TCGA-CC-A7IG-01A
47 years, male, asian, stage:ii, dead, 299 days
45.9
TCGA-DD-AAE0-01A
45 years, female, asian, stage:iiia, alive, 555 days
40.5
TCGA-ZP-A9D2-01A
51 years, male, white, dead, 765 days
40.5
TCGA-BC-4072-01B
74 years, female, white, stage:iiia, dead, 1490 days
36.4
TCGA-G3-A25X-01A
73 years, male, asian, stage:ii, alive, 1779 days
31.6
TCGA-G3-A7M9-01A
70 years, male, white, stage:iiib, dead, 56 days
30.2
TCGA-CC-5263-01A
35 years, male, asian, stage:iiia, dead, 129 days
29.1
TCGA-G3-AAV7-01A
38 years, male, asian, stage:ii, alive, 361 days
21.2
TCGA-DD-AA3A-01A
81 years, female, white, stage:i, dead, 410 days
19.9
TCGA-DD-AAD5-01A
54 years, male, asian, stage:i, alive, 1345 days
15.4
TCGA-CC-A1HT-01A
50 years, male, asian, stage:iiia, dead, 101 days
2.6
TCGA-DD-A3A6-01A
72 years, female, white, stage:ii, dead, 3258 days
2.3
TCGA-ED-A7PX-01A
48 years, female, asian, stage:ii, alive, 6 days
2.2
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:ii, alive, 382 days
2.1
TCGA-BC-A112-01A
80 years, male, white, dead, 153 days
1.9
TCGA-FV-A3I0-01A
76 years, female, white, stage:ii, alive, 848 days
1.9
TCGA-CC-5260-01A
61 years, female, asian, stage:iiic, dead, 87 days
1.2
TCGA-ED-A82E-01A
60 years, female, asian, stage:iiia, alive, 408 days
1.0
TCGA-DD-A1EC-01A
20 years, female, white, stage:i, alive, 602 days
1.0
TCGA-BC-A10Q-01A
72 years, female, white, dead, 1135 days
0.5
TCGA-DD-A4NA-01A
67 years, female, white, stage:iiic, alive, 1008 days
0.3
TCGA-CC-A3M9-01A
45 years, male, asian, stage:iiia, dead, 300 days
0.3
TCGA-CC-A7II-01A
55 years, male, asian, stage:iiia, alive, 399 days
0.1
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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