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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. pTPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Small Intestine - Terminal Ileum Average pTPM: 23.6
Samples: 137
Max pTPM: 58.5
Min pTPM: 9.3
Std pTPM: 9.6
Median pTPM: 21.0
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
58.5
GTEX-1192X-2526-SM-59868
50-59 years, male
51.2
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
49.5
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
47.4
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
45.6
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
45.3
GTEX-117YX-0326-SM-5GICL
50-59 years, male
44.1
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
44.0
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
42.6
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
42.6
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
39.8
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
39.4
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
38.1
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
37.9
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
37.5
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
37.2
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
37.0
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
35.4
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
35.2
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
35.2
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
33.7
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
33.3
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
32.2
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
32.2
GTEX-13111-1426-SM-5DUW3
50-59 years, male
30.6
GTEX-183FY-1626-SM-793D8
20-29 years, male
30.6
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
30.4
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
30.0
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
30.0
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
29.9
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
29.6
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
29.6
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
29.1
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
28.8
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
28.2
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
27.5
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
27.4
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
26.7
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
26.6
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
26.3
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
26.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
26.1
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
26.1
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
25.8
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
25.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
25.3
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
25.2
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
25.1
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
24.8
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
24.7
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
24.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
24.3
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
24.3
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
24.3
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
24.0
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
24.0
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
23.9
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
23.8
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
23.6
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
23.2
GTEX-13O61-1326-SM-5KM31
60-69 years, male
22.6
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
22.3
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
22.3
GTEX-1C475-1426-SM-793CH
40-49 years, female
21.6
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
21.6
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
21.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
21.2
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
21.0
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
21.0
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
20.5
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
20.3
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
20.3
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
20.0
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
20.0
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
20.0
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
19.9
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
19.7
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
19.1
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
18.7
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
18.6
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
18.5
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
18.4
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
18.3
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
18.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
18.1
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
18.1
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
18.1
GTEX-14PKU-1626-SM-6871C
40-49 years, female
18.1
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
18.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
18.0
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
17.9
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
17.8
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
17.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
17.6
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
17.5
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
17.2
GTEX-YFCO-1326-SM-664NV
40-49 years, male
17.2
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
17.1
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
17.0
GTEX-14PK6-1626-SM-6871I
70-79 years, female
17.0
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
16.8
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
16.8
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
16.7
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
16.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
16.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
16.4
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
16.1
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
15.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
15.7
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
15.6
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
15.3
GTEX-ZTSS-0926-SM-59865
40-49 years, male
15.3
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
15.2
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
15.2
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
15.2
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
15.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
15.1
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
15.0
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
14.9
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
14.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
14.5
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
14.4
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
14.3
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
14.2
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
14.0
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
13.9
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
13.9
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
13.6
GTEX-111YS-1426-SM-5GID8
60-69 years, male
13.2
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
12.5
GTEX-1122O-1326-SM-5H11F
60-69 years, female
12.3
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
12.0
GTEX-144GM-1026-SM-79OKU
20-29 years, male
11.2
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
11.0
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
9.7
GTEX-14PN3-2026-SM-68729
60-69 years, female
9.7
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
9.3
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.