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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA018492
Glial cells
Not detected
Neuronal cells
High
Neuronal projections
High
Synapses
High
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 54.5
Samples: 160
Max pTPM: 321.5
Min pTPM: 0.1
Std pTPM: 66.8
Median pTPM: 31.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
321.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
289.4
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
281.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
263.1
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
260.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
233.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
219.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
204.4
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
199.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
181.9
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
176.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
173.9
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
156.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
151.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
147.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
144.3
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
140.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
133.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
130.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
129.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
128.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
126.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
121.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
119.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
118.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
113.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
109.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
107.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
98.9
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
97.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
96.3
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
94.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
94.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
91.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
91.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
90.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
88.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
87.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
87.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
86.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
85.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
81.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
79.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
78.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
76.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
75.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
74.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
71.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
70.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
66.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
63.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
61.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
61.2
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
61.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
60.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
59.8
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
54.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
52.3
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
51.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
51.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
49.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
45.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
44.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
43.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
42.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
42.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
41.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
40.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
39.8
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
39.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
38.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
38.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
36.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
35.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
35.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
34.4
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
34.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
34.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
32.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
31.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
31.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
29.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
25.5
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
24.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
24.6
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
24.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
22.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
22.3
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
20.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
18.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
17.1
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
16.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
15.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
15.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
15.4
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
14.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
12.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
11.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
11.5
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
11.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
11.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
10.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
9.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
9.4
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
8.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
8.5
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
8.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
8.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
8.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
8.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
7.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
7.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
7.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
6.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
6.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
5.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
5.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
5.2
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
4.9
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
4.7
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
4.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
4.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
3.9
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
3.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
3.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
3.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
3.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
2.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
2.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
2.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
2.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
2.0
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
1.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
1.8
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
1.7
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
1.7
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
1.6
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
1.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
1.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
1.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
1.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
1.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
1.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
1.2
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
1.1
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
1.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
0.8
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
0.8
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
0.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
0.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
0.6
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
0.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
0.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
0.5
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
0.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
0.5
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
0.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
0.4
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
0.2
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
0.1
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.