We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 63.6
Samples: 160
Max pTPM: 173.2
Min pTPM: 20.5
Std pTPM: 22.8
Median pTPM: 60.0
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
173.2
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
133.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
127.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
125.0
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
120.0
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
118.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
117.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
116.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
113.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
107.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
106.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
101.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
98.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
98.0
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
94.3
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
94.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
93.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
92.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
91.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
91.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
88.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
85.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
81.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
81.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
81.4
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
81.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
80.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
79.1
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
78.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
76.5
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
76.4
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
76.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
73.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
73.8
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
73.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
73.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
73.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
73.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
72.8
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
72.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
71.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
71.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
70.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
70.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
70.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
70.5
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
70.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
70.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
70.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
70.1
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
69.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
69.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
67.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
67.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
67.0
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
66.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
66.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
66.4
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
66.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
65.7
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
65.1
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
64.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
64.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
64.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
63.8
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
63.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
63.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
62.8
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
62.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
62.6
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
62.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
62.6
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
62.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
62.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
61.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
61.8
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
61.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
61.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
60.7
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
60.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
59.8
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
58.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
58.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
57.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
57.0
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
56.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
56.4
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
56.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
55.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
55.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
55.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
55.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
55.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
54.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
54.7
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
54.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
54.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
54.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
54.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
54.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
53.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
53.7
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
53.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
53.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
53.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
52.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
52.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
52.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
52.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
51.5
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
50.9
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
50.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
49.6
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
49.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
48.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
48.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
48.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
48.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
48.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
48.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
47.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
47.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
47.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
47.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
47.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
47.1
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
46.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
46.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
45.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
45.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
45.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
45.5
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
44.9
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
44.7
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
44.0
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
43.5
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
43.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
42.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
42.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
41.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
41.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
40.4
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
40.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
40.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
39.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
39.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
39.2
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
38.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
38.4
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
38.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
37.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
37.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
37.1
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
36.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
36.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
35.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
34.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
28.4
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
25.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
20.5
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.