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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA004802
Glial cells
Not detected
Neuronal cells
Not detected
Neuronal projections
Medium
Synapses
Medium
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 109.7
Samples: 160
Max pTPM: 386.7
Min pTPM: 1.9
Std pTPM: 92.5
Median pTPM: 91.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
386.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
381.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
349.8
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
348.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
342.7
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
332.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
320.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
317.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
308.6
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
305.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
300.6
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
299.5
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
285.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
277.7
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
277.3
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
262.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
258.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
219.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
219.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
214.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
202.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
199.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
190.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
188.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
185.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
180.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
179.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
177.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
177.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
173.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
173.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
172.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
171.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
171.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
169.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
166.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
166.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
164.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
161.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
159.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
159.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
159.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
159.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
156.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
156.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
153.9
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
151.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
150.4
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
149.9
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
145.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
142.7
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
141.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
135.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
135.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
134.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
131.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
130.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
130.5
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
128.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
125.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
118.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
114.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
114.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
114.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
112.7
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
112.3
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
112.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
111.2
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
109.1
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
109.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
107.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
102.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
101.3
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
97.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
96.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
95.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
94.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
93.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
93.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
91.7
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
91.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
89.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
88.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
87.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
86.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
84.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
84.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
83.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
82.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
81.9
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
80.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
76.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
75.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
74.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
72.7
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
67.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
66.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
66.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
64.8
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
64.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
63.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
56.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
55.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
53.3
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
52.3
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
51.1
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
50.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
47.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
46.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
46.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
42.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
41.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
41.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
39.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
37.9
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
37.6
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
36.3
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
34.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
31.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
31.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
29.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
29.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
29.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
24.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
23.7
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
23.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
22.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
21.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
20.3
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
20.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
18.7
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
18.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
18.2
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
17.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
17.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
16.3
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
15.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
14.4
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
14.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
14.3
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
13.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
13.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
12.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
10.7
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
10.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
10.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
10.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
10.5
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
8.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
8.6
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
8.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
7.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
6.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
5.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
5.2
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
3.9
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
3.5
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
3.2
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
2.1
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
1.9
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.