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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. pTPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Small Intestine - Terminal Ileum Average pTPM: 27.7
Samples: 137
Max pTPM: 145.3
Min pTPM: 0.1
Std pTPM: 35.9
Median pTPM: 8.8
GTEX-13O61-1326-SM-5KM31
60-69 years, male
145.3
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
142.8
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
139.8
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
118.0
GTEX-183FY-1626-SM-793D8
20-29 years, male
110.0
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
103.0
GTEX-1C475-1426-SM-793CH
40-49 years, female
101.3
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
101.1
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
94.9
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
94.3
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
93.4
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
91.6
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
91.2
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
86.4
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
84.0
GTEX-14PK6-1626-SM-6871I
70-79 years, female
81.7
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
81.4
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
80.4
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
80.0
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
78.0
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
73.8
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
68.7
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
68.5
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
67.3
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
65.7
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
62.8
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
61.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
58.2
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
57.7
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
53.3
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
53.1
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
48.4
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
48.1
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
46.4
GTEX-14PKU-1626-SM-6871C
40-49 years, female
43.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
43.5
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
42.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
39.6
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
38.4
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
38.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
37.3
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
33.2
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
31.9
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
30.9
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
30.4
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
29.5
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
28.9
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
25.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
24.3
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
23.2
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
18.9
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
18.9
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
18.5
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
18.3
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
17.2
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
17.1
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
16.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
14.4
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
13.9
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
13.8
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
13.0
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
12.2
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
11.7
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
11.4
GTEX-144GM-1026-SM-79OKU
20-29 years, male
10.5
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
10.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
9.0
GTEX-1192X-2526-SM-59868
50-59 years, male
8.9
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
8.8
GTEX-13111-1426-SM-5DUW3
50-59 years, male
7.6
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
7.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
6.8
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
6.3
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
6.2
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
6.0
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
5.9
GTEX-13113-1226-SM-5EGHT
60-69 years, female
5.6
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
5.0
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
5.0
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
4.7
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
4.6
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
4.4
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
4.4
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
4.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
3.8
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
3.8
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
3.3
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
3.3
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
3.0
GTEX-YFCO-1326-SM-664NV
40-49 years, male
3.0
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
2.8
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
2.8
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
2.7
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
2.7
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
2.5
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
2.3
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
2.3
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
2.1
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
2.1
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
2.1
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
1.9
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
1.9
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
1.7
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
1.6
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
1.6
GTEX-117YX-0326-SM-5GICL
50-59 years, male
1.4
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
1.4
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
1.3
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
1.3
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
1.2
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
1.1
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
1.1
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
1.1
GTEX-ZTSS-0926-SM-59865
40-49 years, male
1.1
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
1.0
GTEX-14PN3-2026-SM-68729
60-69 years, female
1.0
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
1.0
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
1.0
GTEX-1122O-1326-SM-5H11F
60-69 years, female
0.9
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
0.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
0.8
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
0.8
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
0.8
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
0.7
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
0.7
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
0.6
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
0.6
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
0.5
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
0.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
0.5
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
0.5
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
0.4
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
0.3
GTEX-111YS-1426-SM-5GID8
60-69 years, male
0.2
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
0.2
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
0.2
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
0.1
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.