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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 219.3
Min pTPM: 6.6
Std pTPM: 40.5
Median pTPM: 42.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
219.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
210.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
207.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
174.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
123.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
122.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
120.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
118.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
115.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
112.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
109.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
106.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
92.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
85.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
84.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
82.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
79.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
78.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
78.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
76.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
74.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
73.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
73.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
69.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
69.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
69.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
69.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
69.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
68.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
66.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
66.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
65.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
63.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
63.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
62.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
62.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
61.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
59.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
59.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
58.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
58.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
56.3
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
55.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
55.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
51.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
50.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
50.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
47.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
43.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
42.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
42.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
42.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
41.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
41.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
40.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
40.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
40.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
39.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
39.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
37.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
36.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
36.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
35.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
35.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
34.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
33.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
33.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
32.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
32.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
32.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
32.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
31.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
31.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
31.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
30.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
29.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
29.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
28.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
28.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
28.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
28.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
25.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
24.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
24.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
23.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
22.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
22.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
19.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
18.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
16.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
15.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
14.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
10.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
6.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
6.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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