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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 729.3
Min pTPM: 15.9
Std pTPM: 109.9
Median pTPM: 80.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
729.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
455.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
409.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
400.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
385.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
359.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
242.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
224.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
221.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
219.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
216.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
214.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
213.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
196.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
194.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
187.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
175.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
161.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
138.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
137.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
136.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
132.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
130.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
130.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
110.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
110.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
108.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
107.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
106.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
101.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
99.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
98.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
98.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
97.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
97.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
97.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
96.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
95.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
93.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
93.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
91.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
87.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
85.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
82.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
78.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
77.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
77.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
76.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
76.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
76.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
74.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
73.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
73.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
72.3
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
71.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
71.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
70.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
69.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
68.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
67.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
66.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
65.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
65.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
64.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
64.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
61.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
60.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
58.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
58.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
57.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
57.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
55.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
53.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
52.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
50.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
49.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
48.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
42.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
42.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
41.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
40.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
39.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
32.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
31.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
27.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
25.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
24.1
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
15.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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