We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB001943
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
High
Synapses
High
CAUDATE - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA075997
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
High
Synapses
High
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 75.9
Samples: 160
Max pTPM: 323.3
Min pTPM: 3.0
Std pTPM: 60.2
Median pTPM: 61.4
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
323.3
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
282.1
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
276.0
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
251.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
218.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
216.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
204.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
200.1
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
185.4
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
181.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
178.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
173.4
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
169.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
158.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
156.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
154.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
149.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
146.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
144.9
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
142.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
139.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
136.8
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
133.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
132.6
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
128.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
127.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
126.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
123.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
123.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
123.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
121.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
120.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
120.5
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
119.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
117.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
116.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
115.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
114.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
113.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
111.0
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
110.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
104.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
102.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
101.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
101.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
100.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
98.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
95.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
94.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
92.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
92.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
90.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
88.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
88.6
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
87.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
87.7
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
86.3
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
86.1
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
85.3
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
85.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
84.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
83.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
83.7
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
82.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
80.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
78.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
78.7
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
77.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
76.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
72.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
71.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
71.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
70.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
70.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
67.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
65.2
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
64.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
63.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
62.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
62.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
60.7
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
60.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
60.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
58.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
58.4
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
58.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
56.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
56.4
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
55.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
54.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
54.7
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
54.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
52.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
51.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
50.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
49.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
48.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
42.7
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
42.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
42.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
40.0
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
39.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
39.3
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
38.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
38.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
38.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
37.9
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
37.9
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
37.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
37.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
34.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
34.5
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
34.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
33.3
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
31.5
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
30.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
29.4
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
29.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
29.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
27.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
25.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
25.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
25.4
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
25.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
24.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
24.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
24.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
23.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
23.0
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
22.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
22.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
22.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
20.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
19.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
18.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
17.7
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
17.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
17.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
17.2
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
16.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
16.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
16.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
15.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
14.1
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
13.6
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
13.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
12.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
12.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
12.0
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
11.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
11.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
11.2
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
10.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
9.4
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
9.4
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
6.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
5.7
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
5.6
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
3.6
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
3.0
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.