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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APOC1 is prognostic, high expression is favourable in liver cancer
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
3253.7
Number of samples
365
Samples
Sample
Description
FPKM
TCGA-CC-5259-01A
60 years, female, asian, stage:iiic, alive, 250 days
20348.2
TCGA-DD-AACO-01A
40 years, male, asian, stage:i, alive, 1876 days
16473.2
TCGA-G3-AAV0-01A
58 years, male, asian, stage:i, alive, 476 days
15173.2
TCGA-2Y-A9H1-01A
58 years, male, white, stage:i, dead, 1229 days
15006.9
TCGA-ES-A2HS-01A
80 years, male, white, stage:i, dead, 688 days
13904.0
TCGA-DD-AADS-01A
63 years, male, asian, stage:i, alive, 474 days
12690.9
TCGA-DD-A73G-01A
73 years, female, white, stage:i, alive, 3478 days
12016.7
TCGA-DD-AAEB-01A
60 years, male, asian, stage:i, alive, 478 days
11058.1
TCGA-DD-AACG-01A
52 years, male, asian, stage:ii, dead, 469 days
10872.4
TCGA-DD-A39V-01A
77 years, male, white, stage:ii, dead, 643 days
10649.8
TCGA-DD-AADM-01A
58 years, male, asian, stage:ii, dead, 12 days
10357.6
TCGA-DD-AAE4-01A
49 years, female, asian, stage:i, alive, 608 days
8888.7
TCGA-DD-AADO-01A
55 years, male, asian, stage:i, alive, 453 days
8863.0
TCGA-2Y-A9H3-01A
45 years, male, white, stage:ii, alive, 1516 days
8662.8
TCGA-G3-AAUZ-01A
48 years, male, stage:i, alive, 480 days
8588.9
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:ii, alive, 594 days
8560.2
TCGA-MI-A75G-01A
63 years, male, white, stage:ii, alive, 698 days
8425.7
TCGA-DD-A119-01A
40 years, male, asian, stage:iv, dead, 223 days
8328.8
TCGA-WQ-AB4B-01A
62 years, male, white, stage:ii, alive, 395 days
8195.0
TCGA-DD-AAE3-01A
50 years, male, asian, stage:i, alive, 566 days
8026.8
TCGA-DD-A3A3-01A
45 years, male, asian, stage:i, dead, 535 days
7988.5
TCGA-FV-A495-01A
51 years, female, white, stage:ii, alive, 1 days
7808.0
TCGA-DD-A39Z-01A
43 years, female, stage:ii, dead, 601 days
7751.1
TCGA-KR-A7K2-01A
64 years, male, white, stage:i, alive, 829 days
7722.1
TCGA-CC-A123-01A
24 years, female, asian, stage:iiia, alive, 219 days
7653.2
TCGA-DD-A3A1-01A
65 years, male, stage:iiia, dead, 233 days
6875.8
TCGA-RC-A7SF-01A
66 years, male, asian, stage:i, alive, 579 days
6607.7
TCGA-G3-AAV5-01A
67 years, male, white, stage:ii, alive, 354 days
6588.2
TCGA-DD-A116-01A
68 years, male, asian, stage:iiia, dead, 1622 days
6576.2
TCGA-DD-AADF-01A
64 years, female, asian, stage:i, dead, 115 days
6542.7
TCGA-DD-AAEE-01A
55 years, male, asian, stage:i, alive, 810 days
6438.9
TCGA-DD-AACQ-01A
50 years, male, asian, stage:ii, dead, 432 days
6436.6
TCGA-DD-AACJ-01A
75 years, male, asian, stage:ii, alive, 2102 days
6397.8
TCGA-DD-A73B-01A
72 years, female, white, stage:i, dead, 283 days
6171.1
TCGA-DD-AAEA-01A
65 years, male, asian, stage:i, alive, 575 days
6121.8
TCGA-MI-A75C-01A
64 years, male, white, stage:i, alive, 291 days
6094.5
TCGA-O8-A75V-01A
54 years, male, stage:i, alive, 538 days
6050.6
TCGA-RC-A7S9-01A
47 years, female, asian, stage:i, alive, 640 days
6006.3
TCGA-DD-AAED-01A
51 years, male, asian, stage:i, alive, 763 days
5973.5
TCGA-MI-A75E-01A
61 years, male, white, stage:iiic, alive, 507 days
5902.1
TCGA-DD-AAC9-01A
51 years, male, asian, stage:i, alive, 347 days
5874.1
TCGA-DD-A3A7-01A
67 years, male, stage:iiib, dead, 419 days
5800.5
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:i, dead, 438 days
5661.4
TCGA-NI-A4U2-01A
71 years, male, white, stage:iiia, dead, 1791 days
5525.1
TCGA-ED-A7PY-01A
20 years, female, asian, stage:ii, alive, 390 days
5497.1
TCGA-DD-AADU-01A
60 years, male, asian, stage:ii, alive, 554 days
5414.3
TCGA-FV-A496-01A
84 years, female, white, stage:i, alive, 10 days
5319.7
TCGA-DD-AACD-01A
48 years, male, asian, stage:i, dead, 381 days
5264.7
TCGA-FV-A4ZP-01A
78 years, male, white, stage:iiia, dead, 2486 days
5139.3
TCGA-RC-A6M4-01A
74 years, female, white, stage:iiia, alive, 22 days
5114.5
TCGA-G3-A5SK-01A
58 years, male, white, stage:i, alive, 744 days
5112.2
TCGA-DD-A3A2-01A
76 years, female, white, stage:i, dead, 2131 days
5085.0
TCGA-CC-A7IF-01A
59 years, male, asian, stage:iiia, dead, 649 days
5076.8
TCGA-BC-A10S-01A
81 years, male, white, dead, 1423 days
5067.5
TCGA-G3-A5SI-01A
44 years, male, asian, stage:ii, dead, 768 days
5052.6
TCGA-DD-AAD8-01A
73 years, female, asian, stage:i, alive, 1219 days
5009.8
TCGA-DD-AAE7-01A
72 years, male, asian, stage:i, alive, 644 days
5001.3
TCGA-MI-A75H-01A
77 years, male, white, alive, 747 days
4965.3
TCGA-DD-AADJ-01A
70 years, female, asian, stage:i, alive, 1066 days
4951.6
TCGA-T1-A6J8-01A
68 years, male, white, alive, 23 days
4949.2
TCGA-DD-AACB-01A
74 years, female, asian, stage:i, alive, 2324 days
4916.4
TCGA-BD-A2L6-01A
69 years, male, white, alive, 1363 days
4906.8
TCGA-RC-A7SK-01A
59 years, male, asian, stage:i, alive, 472 days
4839.2
TCGA-DD-AACF-01A
68 years, male, asian, stage:i, dead, 365 days
4828.2
TCGA-DD-A3A9-01A
64 years, female, white, stage:ivb, dead, 931 days
4790.2
TCGA-DD-AAVR-01A
44 years, male, asian, stage:i, alive, 2513 days
4786.0
TCGA-G3-AAV2-01A
50 years, male, white, stage:i, alive, 372 days
4763.2
TCGA-FV-A2QQ-01A
80 years, male, white, stage:i, alive, 729 days
4734.3
TCGA-UB-A7MA-01A
62 years, female, white, stage:ii, alive, 848 days
4631.6
TCGA-ED-A7XO-01A
29 years, male, asian, stage:iiia, alive, 427 days
4606.9
TCGA-WX-AA44-01A
64 years, female, white, stage:i, alive, 615 days
4605.0
TCGA-DD-AAW2-01A
69 years, male, asian, stage:i, alive, 1855 days
4524.0
TCGA-DD-AADG-01A
70 years, male, asian, stage:iiia, alive, 1145 days
4483.5
TCGA-DD-AAEH-01A
73 years, male, asian, stage:i, alive, 784 days
4365.0
TCGA-2Y-A9HB-01A
66 years, male, stage:i, alive, 260 days
4344.4
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:i, dead, 19 days
4317.2
TCGA-DD-AAVU-01A
46 years, male, asian, stage:ii, alive, 2202 days
4300.2
TCGA-WX-AA46-01A
62 years, male, white, stage:ii, alive, 756 days
4273.6
TCGA-DD-A1EG-01A
77 years, male, white, stage:i, dead, 1372 days
4223.4
TCGA-DD-AAW3-01A
69 years, male, asian, stage:i, alive, 1633 days
4199.9
TCGA-DD-AAD0-01A
73 years, female, asian, stage:i, alive, 137 days
4198.3
TCGA-RC-A7SH-01A
42 years, male, asian, stage:ii, alive, 468 days
4152.7
TCGA-DD-AADA-01A
66 years, female, asian, stage:i, alive, 1233 days
4143.0
TCGA-DD-AADN-01A
59 years, male, asian, stage:i, alive, 898 days
4118.9
TCGA-5C-A9VH-01A
70 years, male, white, stage:i, alive, 322 days
4088.2
TCGA-DD-AACT-01A
69 years, female, asian, stage:i, alive, 1562 days
4086.6
TCGA-K7-A6G5-01A
66 years, male, white, stage:i, alive, 512 days
4082.3
TCGA-EP-A3JL-01A
76 years, male, white, stage:i, alive, 303 days
4076.6
TCGA-UB-A7ME-01A
51 years, male, asian, stage:i, alive, 486 days
4058.8
TCGA-DD-AADK-01A
68 years, female, asian, stage:ii, alive, 1049 days
4015.2
TCGA-2Y-A9H6-01A
68 years, female, white, stage:i, alive, 357 days
4011.9
TCGA-DD-A73D-01A
68 years, female, white, stage:ii, alive, 693 days
4008.7
TCGA-DD-AADR-01A
58 years, male, asian, stage:i, alive, 2028 days
4007.2
TCGA-DD-A3A8-01A
75 years, male, white, stage:ii, dead, 11 days
3986.8
TCGA-DD-A4NO-01A
66 years, male, white, stage:i, alive, 2245 days
3978.4
TCGA-BC-A69I-01A
69 years, male, white, stage:i, alive, 387 days
3964.0
TCGA-5R-AA1C-01A
57 years, male, white, stage:ii, alive, 520 days
3938.6
TCGA-ZS-A9CE-01A
79 years, female, white, stage:ii, alive, 1241 days
3933.1
TCGA-DD-AACY-01A
61 years, male, asian, stage:i, alive, 1450 days
3916.4
TCGA-DD-AACC-01A
61 years, male, asian, stage:i, dead, 1685 days
3902.6
TCGA-DD-AACW-01A
43 years, male, asian, stage:i, alive, 1424 days
3894.5
TCGA-G3-A3CH-01A
53 years, male, asian, stage:iiia, alive, 780 days
3875.3
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:i, alive, 1452 days
3866.1
TCGA-DD-AAE6-01A
59 years, female, asian, stage:i, alive, 141 days
3812.8
TCGA-G3-A3CG-01A
80 years, male, white, stage:i, alive, 673 days
3800.1
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:iiib, alive, 396 days
3790.4
TCGA-DD-AACS-01A
39 years, male, asian, stage:i, alive, 1804 days
3783.9
TCGA-G3-A7M5-01A
76 years, male, asian, stage:i, alive, 447 days
3757.3
TCGA-DD-AACX-01A
66 years, male, asian, stage:ii, alive, 170 days
3726.5
TCGA-BC-A69H-01A
64 years, male, white, stage:ii, alive, 444 days
3716.2
TCGA-DD-A73A-01A
71 years, male, white, stage:i, alive, 728 days
3705.4
TCGA-DD-AAW1-01A
55 years, male, asian, stage:iiia, alive, 1989 days
3692.4
TCGA-G3-A25V-01A
68 years, male, white, stage:i, alive, 860 days
3679.1
TCGA-HP-A5N0-01A
88 years, female, dead, 1147 days
3669.8
TCGA-ZS-A9CG-01A
55 years, male, white, stage:ii, alive, 341 days
3656.3
TCGA-DD-A3A5-01A
66 years, female, white, stage:iii, dead, 3125 days
3652.3
TCGA-ZP-A9CZ-01A
72 years, male, asian, alive, 706 days
3645.6
TCGA-CC-A7IL-01A
61 years, male, asian, stage:iiia, dead, 278 days
3619.1
TCGA-CC-A7IK-01A
59 years, male, asian, stage:iiia, dead, 262 days
3588.2
TCGA-ZP-A9D4-01A
64 years, female, white, alive, 395 days
3569.1
TCGA-DD-A73C-01A
65 years, female, white, stage:iiia, alive, 701 days
3569.0
TCGA-CC-A7IH-01A
58 years, male, asian, stage:iiia, alive, 365 days
3558.0
TCGA-DD-A73F-01A
77 years, female, white, stage:i, alive, 1085 days
3555.0
TCGA-DD-AAE9-01A
69 years, male, asian, stage:i, alive, 722 days
3546.1
TCGA-DD-AACI-01A
69 years, male, asian, stage:ii, alive, 1618 days
3536.2
TCGA-RC-A7SB-01A
53 years, male, asian, stage:ii, alive, 588 days
3517.7
TCGA-CC-A7IG-01A
47 years, male, asian, stage:ii, dead, 299 days
3502.4
TCGA-DD-AAVP-01A
48 years, male, asian, stage:i, alive, 2752 days
3485.0
TCGA-DD-A4NI-01A
67 years, male, white, stage:ii, alive, 816 days
3474.5
TCGA-DD-A1EB-01A
72 years, female, stage:i, alive, 2017 days
3471.9
TCGA-DD-AAD6-01A
66 years, male, asian, stage:iiia, alive, 672 days
3453.8
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:i, alive, 1900 days
3444.2
TCGA-G3-A5SM-01A
58 years, male, white, stage:ii, alive, 520 days
3432.3
TCGA-2Y-A9GW-01A
64 years, male, white, stage:i, dead, 1271 days
3415.0
TCGA-2Y-A9H7-01A
81 years, female, white, stage:i, alive, 1168 days
3407.5
TCGA-KR-A7K0-01A
65 years, male, white, stage:i, dead, 65 days
3391.7
TCGA-G3-A25Z-01A
58 years, male, asian, stage:i, alive, 655 days
3348.3
TCGA-DD-AAVY-01A
56 years, male, asian, stage:iiia, alive, 1970 days
3346.2
TCGA-2Y-A9GT-01A
51 years, male, white, stage:i, dead, 1624 days
3340.3
TCGA-KR-A7K7-01A
61 years, female, white, stage:ii, alive, 951 days
3295.5
TCGA-2Y-A9H9-01A
70 years, male, white, stage:i, alive, 697 days
3292.3
TCGA-BC-A10U-01A
69 years, male, white, dead, 837 days
3245.7
TCGA-ZS-A9CD-01A
73 years, male, white, stage:ii, dead, 1386 days
3228.4
TCGA-G3-A25U-01A
63 years, female, asian, stage:i, alive, 1636 days
3214.4
TCGA-CC-A9FS-01A
55 years, male, asian, stage:ii, alive, 211 days
3209.4
TCGA-PD-A5DF-01A
58 years, female, white, stage:iiib, dead, 639 days
3200.0
TCGA-G3-A5SL-01A
70 years, male, white, stage:ii, alive, 621 days
3194.7
TCGA-MI-A75I-01A
61 years, male, black or african american, alive, 630 days
3191.9
TCGA-DD-A115-01A
53 years, male, white, stage:iiia, dead, 2542 days
3188.9
TCGA-UB-AA0V-01A
69 years, female, white, stage:i, alive, 314 days
3183.9
TCGA-BC-A5W4-01A
69 years, male, white, stage:iiia, dead, 547 days
3169.5
TCGA-G3-AAV3-01A
58 years, female, white, stage:ii, alive, 412 days
3120.1
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:i, alive, 2728 days
3119.1
TCGA-BC-A10T-01A
76 years, male, white, dead, 837 days
3095.0
TCGA-ZP-A9CY-01A
66 years, female, white, alive, 782 days
3073.1
TCGA-DD-AAEI-01A
72 years, male, asian, stage:i, alive, 1531 days
3063.5
TCGA-2Y-A9HA-01A
70 years, male, white, stage:ii, dead, 36 days
3055.4
TCGA-G3-A25S-01A
64 years, male, white, stage:i, dead, 416 days
3034.1
TCGA-CC-5262-01A
67 years, male, asian, stage:iiic, dead, 103 days
3027.8
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:ii, alive, 6 days
3027.7
TCGA-DD-AAVX-01A
38 years, male, asian, stage:ii, alive, 1570 days
3024.4
TCGA-5C-AAPD-01A
61 years, male, asian, stage:ii, alive, 20 days
3020.0
TCGA-ED-A66Y-01A
51 years, female, asian, stage:iiia, dead, 296 days
2994.8
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:iiia, alive, 20 days
2989.8
TCGA-DD-A1EI-01A
46 years, male, asian, stage:i, alive, 183 days
2982.5
TCGA-BD-A3ER-01A
62 years, male, white, stage:ii, alive, 1115 days
2975.2
TCGA-DD-AADV-01A
50 years, male, asian, stage:i, alive, 574 days
2970.7
TCGA-G3-AAV1-01A
51 years, male, asian, stage:iiic, dead, 359 days
2954.1
TCGA-HP-A5MZ-01A
62 years, male, stage:i, dead, 91 days
2953.1
TCGA-DD-AAVV-01A
56 years, male, asian, stage:ii, alive, 2455 days
2945.1
TCGA-BC-A10R-01A
66 years, female, white, dead, 308 days
2938.5
TCGA-DD-A113-01A
55 years, female, white, stage:ii, alive, 2425 days
2905.8
TCGA-G3-A7M7-01A
65 years, male, white, stage:i, alive, 361 days
2898.6
TCGA-BC-A216-01A
62 years, female, white, stage:iiia, alive, 1351 days
2897.1
TCGA-DD-AAD3-01A
43 years, male, asian, stage:i, alive, 1295 days
2844.6
TCGA-DD-AAW0-01A
54 years, male, asian, stage:i, alive, 2015 days
2842.7
TCGA-DD-AAEK-01A
51 years, male, asian, stage:ii, alive, 1067 days
2833.8
TCGA-5R-AAAM-01A
65 years, female, white, stage:ii, dead, 46 days
2829.2
TCGA-WJ-A86L-01A
68 years, female, white, stage:i, alive, 345 days
2801.9
TCGA-BC-A10X-01A
52 years, female, white, stage:iiia, dead, 770 days
2798.1
TCGA-DD-AADI-01A
43 years, female, asian, stage:i, alive, 1085 days
2790.0
TCGA-LG-A9QD-01A
68 years, male, white, stage:iiia, alive, 366 days
2754.7
TCGA-DD-A39Y-01A
67 years, male, asian, stage:i, dead, 171 days
2738.4
TCGA-ZP-A9D1-01A
56 years, female, white, alive, 21 days
2698.9
TCGA-BC-A110-01A
51 years, female, black or african american, dead, 2116 days
2642.9
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:i, alive, 519 days
2632.3
TCGA-K7-A5RF-01A
64 years, male, white, stage:i, alive, 631 days
2625.2
TCGA-GJ-A3OU-01A
59 years, male, white, stage:i, alive, 879 days
2621.5
TCGA-DD-AADB-01A
51 years, male, asian, stage:i, alive, 1242 days
2615.9
TCGA-EP-A26S-01A
70 years, male, white, stage:i, alive, 608 days
2580.5
TCGA-DD-A39X-01A
78 years, female, white, stage:i, dead, 1694 days
2570.6
TCGA-DD-AADP-01A
45 years, male, asian, stage:i, alive, 458 days
2570.1
TCGA-G3-A7M8-01A
31 years, male, asian, stage:i, alive, 430 days
2570.0
TCGA-2Y-A9H0-01A
49 years, male, white, stage:iiia, alive, 3675 days
2506.4
TCGA-DD-A4NP-01A
32 years, male, white, stage:i, alive, 3308 days
2504.7
TCGA-DD-AACP-01A
65 years, male, asian, stage:i, alive, 415 days
2495.4
TCGA-DD-A11C-01A
69 years, male, white, stage:i, alive, 662 days
2433.6
TCGA-GJ-A9DB-01A
68 years, male, white, stage:i, dead, 67 days
2411.7
TCGA-DD-AACU-01A
59 years, male, asian, stage:i, alive, 1567 days
2375.1
TCGA-DD-AADL-01A
58 years, male, asian, stage:i, alive, 636 days
2369.9
TCGA-2Y-A9H5-01A
59 years, female, white, stage:i, dead, 555 days
2362.7
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:ii, dead, 415 days
2361.9
TCGA-2Y-A9GX-01A
68 years, male, white, stage:i, alive, 2442 days
2346.9
TCGA-DD-A1ED-01A
68 years, male, white, stage:i, alive, 2301 days
2340.6
TCGA-CC-A3MC-01A
54 years, male, asian, stage:iiia, alive, 363 days
2337.0
TCGA-DD-AAD2-01A
66 years, male, asian, stage:i, alive, 658 days
2332.8
TCGA-DD-AAD1-01A
51 years, female, asian, stage:i, alive, 564 days
2303.1
TCGA-NI-A8LF-01A
74 years, male, white, stage:i, alive, 799 days
2297.4
TCGA-DD-A11A-01A
67 years, male, black or african american, stage:i, alive, 79 days
2294.9
TCGA-UB-A7MC-01A
59 years, male, white, stage:iiia, alive, 500 days
2291.1
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:i, dead, 52 days
2262.0
TCGA-UB-AA0U-01A
60 years, male, white, stage:ii, alive, 327 days
2221.9
TCGA-BD-A3EP-01A
76 years, female, black or african american, stage:i, alive, 409 days
2205.7
TCGA-BC-A3KG-01A
68 years, female, white, stage:ii, alive, 680 days
2205.6
TCGA-UB-A7MB-01A
24 years, male, white, stage:ii, alive, 601 days
2203.0
TCGA-DD-AACA-01A
65 years, male, asian, stage:i, alive, 2301 days
2187.4
TCGA-DD-A4NK-01A
80 years, female, white, stage:iiia, dead, 1210 days
2185.9
TCGA-FV-A2QR-01A
male, white, stage:i, dead, 581 days
2180.8
TCGA-G3-AAV4-01A
83 years, female, white, stage:i, dead, 27 days
2175.9
TCGA-CC-A7IE-01A
57 years, male, asian, stage:iiia, dead, 217 days
2173.4
TCGA-DD-A39W-01A
29 years, female, white, stage:iii, dead, 827 days
2171.6
TCGA-G3-A3CK-01A
61 years, male, asian, stage:i, alive, 585 days
2168.4
TCGA-DD-AAVS-01A
56 years, male, asian, stage:i, alive, 1823 days
2157.5
TCGA-DD-AADY-01A
55 years, female, asian, stage:i, alive, 555 days
2151.8
TCGA-FV-A3I1-01A
female, white, stage:ii, dead, 247 days
2144.2
TCGA-XR-A8TF-01A
74 years, male, white, stage:i, dead, 693 days
2134.4
TCGA-G3-A5SJ-01A
59 years, male, white, stage:i, alive, 698 days
2116.9
TCGA-ED-A4XI-01A
58 years, male, asian, stage:ii, alive, 819 days
2109.5
TCGA-DD-AAE1-01A
52 years, male, asian, stage:i, alive, 552 days
2107.8
TCGA-EP-A3RK-01A
73 years, male, white, stage:iiia, alive, 363 days
2082.4
TCGA-DD-AACE-01A
62 years, male, asian, stage:i, alive, 2184 days
2068.1
TCGA-MR-A520-01A
58 years, male, white, stage:i, alive, 229 days
2058.5
TCGA-G3-A6UC-01A
65 years, male, white, stage:iiib, alive, 671 days
2054.7
TCGA-DD-AACK-01A
70 years, male, asian, stage:i, alive, 9 days
2035.5
TCGA-DD-AAE2-01A
51 years, male, asian, stage:i, alive, 638 days
2030.5
TCGA-XR-A8TC-01A
43 years, female, white, stage:i, alive, 1339 days
2020.7
TCGA-DD-AAEG-01A
59 years, female, asian, stage:i, alive, 719 days
2002.8
TCGA-DD-A118-01A
77 years, female, white, stage:ii, alive, 3437 days
2002.7
TCGA-DD-AADQ-01A
59 years, male, asian, stage:ii, alive, 436 days
2001.6
TCGA-DD-A4NL-01A
46 years, male, white, stage:i, alive, 1711 days
1982.6
TCGA-DD-A3A6-01A
72 years, female, white, stage:ii, dead, 3258 days
1969.3
TCGA-DD-A3A4-01A
37 years, male, white, stage:iiia, dead, 612 days
1958.0
TCGA-DD-A4NF-01A
72 years, male, white, stage:i, alive, 942 days
1954.4
TCGA-2Y-A9GV-01A
54 years, female, white, stage:i, dead, 2532 days
1922.9
TCGA-2Y-A9GS-01A
58 years, male, white, dead, 724 days
1907.4
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:ii, alive, 94 days
1906.0
TCGA-5R-AA1D-01A
17 years, female, white, stage:iiia, alive, 449 days
1903.8
TCGA-DD-A4NQ-01A
60 years, male, white, stage:ii, dead, 373 days
1896.6
TCGA-4R-AA8I-01A
66 years, male, white, stage:ii, dead, 262 days
1882.7
TCGA-XR-A8TG-01A
59 years, male, white, stage:i, alive, 898 days
1857.6
TCGA-ED-A7XP-01A
53 years, female, asian, stage:ii, alive, 400 days
1855.4
TCGA-CC-A5UE-01A
48 years, male, asian, stage:iiib, dead, 272 days
1848.3
TCGA-EP-A2KB-01A
46 years, female, white, stage:i, dead, 596 days
1843.7
TCGA-DD-AACN-01A
32 years, male, asian, stage:i, alive, 1302 days
1829.5
TCGA-ED-A627-01A
74 years, male, white, stage:i, alive, 423 days
1816.2
TCGA-ED-A8O6-01A
50 years, female, asian, stage:iiia, dead, 56 days
1812.8
TCGA-ED-A8O5-01A
59 years, female, asian, stage:iiia, alive, 406 days
1799.4
TCGA-ZP-A9CV-01A
59 years, male, white, dead, 1088 days
1796.6
TCGA-ED-A66X-01A
35 years, male, asian, stage:iiia, alive, 406 days
1784.2
TCGA-DD-AACL-01A
66 years, female, asian, stage:i, dead, 107 days
1783.1
TCGA-DD-A4NJ-01A
54 years, female, white, stage:ii, alive, 928 days
1770.7
TCGA-DD-A1EA-01A
68 years, male, asian, stage:ii, alive, 2415 days
1769.7
TCGA-DD-A11D-01A
57 years, female, white, stage:i, dead, 1560 days
1765.1
TCGA-WQ-A9G7-01A
female, white, alive, 30 days
1763.7
TCGA-LG-A9QC-01A
48 years, male, white, stage:i, alive, 425 days
1753.8
TCGA-DD-A4NS-01A
62 years, female, white, stage:i, dead, 2456 days
1740.9
TCGA-CC-A5UC-01A
63 years, male, asian, stage:iiia, dead, 347 days
1739.8
TCGA-CC-A8HU-01A
39 years, female, asian, stage:iiia, dead, 344 days
1735.7
TCGA-G3-A3CI-01A
71 years, male, white, stage:i, alive, 180 days
1735.2
TCGA-DD-A1EE-01A
73 years, male, white, stage:iiia, dead, 349 days
1702.9
TCGA-KR-A7K8-01A
57 years, male, stage:i, alive, 906 days
1700.3
TCGA-GJ-A6C0-01A
75 years, female, white, stage:ii, dead, 31 days
1699.6
TCGA-DD-A4NV-01A
61 years, male, white, stage:iiia, alive, 2398 days
1694.8
TCGA-BC-A217-01A
75 years, female, white, stage:ii, dead, 1397 days
1685.5
TCGA-LG-A6GG-01A
79 years, female, white, stage:ii, alive, 387 days
1683.6
TCGA-DD-AACV-01A
53 years, male, asian, stage:i, alive, 1531 days
1676.2
TCGA-BC-A8YO-01A
66 years, female, white, stage:iiic, alive, 562 days
1644.3
TCGA-XR-A8TD-01A
49 years, female, white, stage:iiib, alive, 1030 days
1628.2
TCGA-DD-A4NN-01A
56 years, female, white, stage:i, dead, 899 days
1614.6
TCGA-ZS-A9CF-01A
64 years, male, white, stage:ii, alive, 2412 days
1585.6
TCGA-DD-A1EK-01A
64 years, female, white, stage:ivb, dead, 558 days
1563.3
TCGA-CC-A7II-01A
55 years, male, asian, stage:iiia, alive, 399 days
1559.8
TCGA-DD-A73E-01A
66 years, male, white, stage:i, alive, 44 days
1553.7
TCGA-DD-AAC8-01A
72 years, male, asian, stage:i, dead, 16 days
1545.4
TCGA-RC-A6M5-01A
20 years, female, white, stage:iva, alive, 15 days
1489.4
TCGA-DD-A11B-01A
73 years, male, white, stage:i, dead, 14 days
1457.3
TCGA-DD-A4NG-01A
77 years, male, white, stage:iiia, dead, 802 days
1453.7
TCGA-CC-A3MB-01A
36 years, male, asian, stage:iiia, dead, 315 days
1444.6
TCGA-DD-A1EJ-01A
71 years, female, white, stage:iiic, dead, 1005 days
1428.5
TCGA-CC-A8HT-01A
74 years, male, asian, stage:iiia, dead, 140 days
1427.6
TCGA-DD-A4NE-01A
75 years, female, white, stage:iiia, dead, 660 days
1415.6
TCGA-EP-A2KA-01A
52 years, female, white, stage:iiia, dead, 627 days
1414.0
TCGA-ZP-A9D0-01A
67 years, female, black or african american, alive, 1091 days
1402.0
TCGA-BC-A3KF-01A
66 years, female, white, stage:i, alive, 8 days
1401.7
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:i, alive, 12 days
1399.6
TCGA-CC-A8HS-01A
18 years, male, asian, stage:iiic, dead, 300 days
1357.4
TCGA-G3-A25X-01A
73 years, male, asian, stage:ii, alive, 1779 days
1355.2
TCGA-2Y-A9GU-01A
55 years, female, white, stage:i, alive, 1939 days
1344.2
TCGA-DD-A4NB-01A
25 years, male, white, stage:i, alive, 989 days
1328.1
TCGA-UB-A7MF-01A
57 years, male, white, stage:iiia, dead, 214 days
1326.9
TCGA-DD-A1EF-01A
57 years, female, white, stage:i, dead, 394 days
1324.4
TCGA-EP-A12J-01A
63 years, male, black or african american, stage:i, alive, 570 days
1309.9
TCGA-G3-A25Y-01A
52 years, female, asian, stage:i, dead, 452 days
1306.2
TCGA-BC-4072-01B
74 years, female, white, stage:iiia, dead, 1490 days
1293.7
TCGA-DD-AACZ-01A
63 years, female, asian, stage:i, dead, 171 days
1289.9
TCGA-CC-A8HV-01A
51 years, female, asian, stage:ii, dead, 279 days
1285.9
TCGA-DD-A4NR-01A
85 years, female, white, stage:i, dead, 9 days
1263.8
TCGA-G3-AAV6-01A
53 years, female, white, stage:iiia, dead, 65 days
1247.6
TCGA-FV-A23B-01A
70 years, female, white, stage:ii, dead, 1852 days
1237.1
TCGA-DD-AAVW-01A
35 years, male, asian, stage:i, alive, 2317 days
1236.6
TCGA-CC-A9FW-01A
68 years, male, asian, stage:iiia, alive, 248 days
1224.3
TCGA-BC-A10Z-01A
62 years, female, white, stage:i, dead, 34 days
1190.2
TCGA-DD-AADC-01A
53 years, male, asian, stage:i, dead, 425 days
1187.5
TCGA-YA-A8S7-01A
69 years, male, white, stage:iiia, dead, 412 days
1185.7
TCGA-DD-AADD-01A
51 years, male, asian, stage:i, alive, 1231 days
1182.4
TCGA-DD-AAE0-01A
45 years, female, asian, stage:iiia, alive, 555 days
1162.0
TCGA-G3-A7M6-01A
60 years, female, white, stage:i, alive, 632 days
1161.3
TCGA-FV-A3R2-01A
75 years, male, white, stage:i, dead, 194 days
1157.7
TCGA-DD-AACH-01A
69 years, male, asian, stage:ii, dead, 195 days
1144.9
TCGA-FV-A3R3-01A
38 years, female, white, stage:i, dead, 366 days
1117.1
TCGA-XR-A8TE-01A
16 years, male, white, stage:iiia, alive, 925 days
1094.6
TCGA-2Y-A9H8-01A
85 years, female, white, dead, 633 days
1078.0
TCGA-ED-A459-01A
47 years, male, asian, stage:ii, alive, 910 days
1059.2
TCGA-2Y-A9GY-01A
64 years, female, white, stage:ii, dead, 757 days
1058.8
TCGA-MR-A8JO-01A
34 years, male, white, stage:i, alive, 330 days
986.6
TCGA-BC-A10Y-01A
76 years, male, white, dead, 711 days
973.6
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:ii, dead, 848 days
944.8
TCGA-CC-5264-01A
71 years, male, asian, stage:iiia, dead, 102 days
937.2
TCGA-BC-A10W-01A
50 years, male, asian, dead, 91 days
896.6
TCGA-BC-4073-01B
73 years, male, white, stage:iiia, alive, 849 days
877.5
TCGA-DD-A4ND-01A
56 years, female, white, stage:i, alive, 2746 days
811.4
TCGA-5C-A9VG-01A
58 years, male, white, stage:ii, alive, 328 days
806.2
TCGA-DD-AADW-01A
48 years, male, asian, stage:i, alive, 587 days
805.5
TCGA-CC-5258-01A
48 years, male, asian, stage:ii, dead, 129 days
739.7
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:ii, alive, 1098 days
737.6
TCGA-DD-A4NH-01A
65 years, female, white, stage:iiib, alive, 917 days
734.1
TCGA-DD-AAD5-01A
54 years, male, asian, stage:i, alive, 1345 days
708.4
TCGA-K7-AAU7-01A
61 years, male, white, stage:ii, alive, 359 days
629.6
TCGA-DD-A1EH-01A
23 years, male, white, stage:iii, alive, 1495 days
614.3
TCGA-CC-5261-01A
44 years, male, asian, stage:ii, dead, 97 days
607.5
TCGA-WX-AA47-01A
33 years, female, white, stage:iiia, dead, 556 days
590.2
TCGA-ED-A7PX-01A
48 years, female, asian, stage:ii, alive, 6 days
540.3
TCGA-RC-A6M6-01A
75 years, male, white, stage:ii, alive, 9 days
513.4
TCGA-ED-A97K-01A
54 years, male, asian, stage:iiia, alive, 6 days
503.6
TCGA-ZP-A9D2-01A
51 years, male, white, dead, 765 days
492.2
TCGA-2Y-A9H2-01A
64 years, female, white, stage:i, alive, 1731 days
461.1
TCGA-G3-A7M9-01A
70 years, male, white, stage:iiib, dead, 56 days
434.4
TCGA-G3-A25T-01A
45 years, female, white, stage:iiia, alive, 1553 days
390.8
TCGA-ED-A5KG-01A
60 years, female, asian, stage:ii, alive, 854 days
356.7
TCGA-G3-AAV7-01A
38 years, male, asian, stage:ii, alive, 361 days
324.6
TCGA-CC-A1HT-01A
50 years, male, asian, stage:iiia, dead, 101 days
277.9
TCGA-CC-5263-01A
35 years, male, asian, stage:iiia, dead, 129 days
274.6
TCGA-BC-A112-01A
80 years, male, white, dead, 153 days
271.7
TCGA-DD-A114-01A
42 years, male, black or african american, stage:ii, dead, 1149 days
244.1
TCGA-CC-A3MA-01A
61 years, male, asian, stage:iiia, dead, 303 days
230.8
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:ii, alive, 382 days
206.5
TCGA-CC-A5UD-01A
45 years, male, asian, stage:iiia, dead, 304 days
168.3
TCGA-CC-A3M9-01A
45 years, male, asian, stage:iiia, dead, 300 days
154.0
TCGA-DD-A1EC-01A
20 years, female, white, stage:i, alive, 602 days
117.8
TCGA-CC-5260-01A
61 years, female, asian, stage:iiic, dead, 87 days
111.7
TCGA-DD-AA3A-01A
81 years, female, white, stage:i, dead, 410 days
96.2
TCGA-FV-A3I0-01A
76 years, female, white, stage:ii, alive, 848 days
20.1
TCGA-ED-A82E-01A
60 years, female, asian, stage:iiia, alive, 408 days
13.9
TCGA-BC-A10Q-01A
72 years, female, white, dead, 1135 days
13.7
TCGA-DD-A4NA-01A
67 years, female, white, stage:iiic, alive, 1008 days
9.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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